LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bisa02g3596	ATGATAATAATCCATTACCTCTCCAGTTCAGCAGTGGCTGTGGCTTCCATGGTGACCCTGTTCGTCCCATCCCTTGGTTCAGATCGTGTGTCCCGGTCCTACCCAGGGGCCAGGCTCATCCTTCACCCCAACAACTCCTCCCCCAACTTGTTTCCATTTGGAAGCTTTCAGGGAAACCCGTTCATATTCAATGGTGATTTGATTGAGGGGTTTGAGAGCTCTAGGGTTTTCTTCTTAGTCCCTTTCTTGCTCTTCCAGGGAGGAGGAATGGATTTGTCCAAGGTCGGGGAAAAGATCTTGAGCTCTGTTAGGACTGCGACAACGCTTGGACGGCTTCCTTCTGTTTCTGATCGGCCTGAGGTTCCAGCTCGAGCTGCCGCTGCCGCAGCTGTTGCGCGTGCTCTTGCAGGATTGCCTCCTCATCAGCGGTATAGTCTATCATCAAGTTCAGAAGAACTGAGTTCTATATATGGAAGCAGAAATAATGGTCAAGTAGTGGAGGAGCTGGAGGATGAATTTTATGAGGAGGACTTTGATTCAGTTAAATATGTTTTAGAGCATGTTCCTGCTGAAGAAAATGAGCTGGCATATTTTGAGAAGCTGGCTGCTCTTAGATTGGCACAACTGGATAGAGTAGCAGAGGGCTTATCTCGCCATGTTATGGAGCATCATGAAGTAATGGTGAAGGGGATGAATTTGGTTAGGGAATTGGAGAGAGACTTGAGAATTGCCAACGTCATCTGCATGAATGGAAGAAGACACTTGACCTCATCTGTGAATGAAGTTTCAAGGGATCTCATTGTTAATTCTTATTCCAAAAAGAAACAAGCTCTTTTGGATGTGCTTCCGGTGTTGACTGAGCTTCAACGTGCGCTGGACATGCAGTCAGCACTTGAATTGCTTGTTGAGGAAGGAAATTACTGCAAGGCATTTCAAGTTCTGTCTGAGTTTTTGCAACTCCTAGATAGTTTGTCAGAACTTTCAGCAATACAAGAGATGAGTCGTGGTGTGGAGGTTTGGCTGGGAAAAACACTACAAAAGTTGGATGCTCTTTTGGTGGGAGTATGTCAGGAATTTAAGGAAGATGGCTATATAACTGTAACTGATGCCTATGCATTAATTGGGGATATTACTGGTCTGGCCGAAAAGATACAAAGTTTCTTCATGCAAGAAGTTATCTCAGGAACCCACACTGTGTTAAAGGCTATTGTGTTTGAGCTTCATAACTGTTACTTTGATAACAGGCTCACGTACAGCGACTTATGCCTTCAAATATCTGAATCTCAGTTTAGGCAGTGCTTATTAAGAACACTGGCTGTTCTTTTTGAACTTATGCGTTCATACCATGAAATTATGGAGTTTCAGCTGGATAGACAGGATGCAGCAGCTCAAACTTCAAATAAATACAATGAGATTTCCTACATTCCAGGTAGGGCTGGGGAAGTTGATGCAGATGTAGGAACATGCAGCAACTCTTTGTCCAGTTGTGGAAATGAAATTCGTGATTCATCTTCAAGGGAAGAAGCTGCAAGAGCCAGCTCACTGGTTGAAACTACCAGCTCTGCTGGTTTACCATGCATAGATTCTCATGATCCAGTTAATGAGGCCAGAAAGGAGGATAGTGCAGCATCAAGCATTGAGTCTCCTTGGTACCATCTGCGCAAAGAAGCTACAGCTTTTGTTTCACAAACCCTTCAACGAGGGCGCAAAAATCTATGGCATCTCACTACAAGCCGTGTTTCAGTATTGCTTTCTTCTGATGCAGCTTGTACCACAAGCATTCACCAATTCTTGAAAAATTATGAAGATCTCAGCATCTTCATTTTGGCTGGGGAAGCCTTTTGTGGAATTGAAGCAGTTGAGTTCAGGCGGAAGTTGAAGGCAGTTTGTGAAAACTATTTCATGGCTTTTCATCGGCAAAATGTTCATGCACTTAAATTGGTTTTGGAGAAAGAGAATTGGATAAAATTACCTCCAGATACAGTGGAAATTATCAGTTTTGCCGGACTGGTTGGTGATGGAGCACCTTTGATTTCTTCATCTAACCGCCAATCAGTTAGTGCCAGTGCAGTTCACTCTGTTCAGAGTCACACCAGTGCGAGGAAAAGTGGGTTCTCTCATTGGCTTCGAAGTGGAAACCCATTTTTGCAGAAATTATCAAACTCTAGAGAAGGCCATTGTTTCTCCCAATCTAATGGATTGACTTATGGTGAATTTGATGGAAGTTCAAGCAACAATTTTTATGGTGATAAAGTCTTGCCTGGAAAGAATGATTCCAATCAAACAAATGGTGCTGATTCTGTTTTAGAATATGAAAATGAGGATCTTCTCGCGGACTTTATTGACGAAGACAGTCAACTGCCAAGTCGAAGTTCAAAACCCAATCATTCAAGAAGAAAGTCTTTAAATTGTAATGGGGAAGAAAATATAGCACAAACTGGATCTTCTCTAAGTCTTTTAAGATCTATGGATAAATATGCAAGGCTTATGCAGAAATTAGAAGTAGTAAATGTTGAATTCTTTAAGGGAATATGCCAATTATTTGAGATTCTTTTCTATTTTGTATACGAAACATTTGGTCAGCAAAATACTTCTTTTAGTGGAAAAGGATCAACTGATTCTCTTAACTATCGACTAAGGACGGCCTTATCGAAAACAACACAAGATTGTGACCAATGGATAAAGCCCTCATCATCATCACCCACTTCTTTGAGTCAATCATTTGTACATTCAGAGGTGACGCCTGCTAACCCTCCCATCACAAATTTGGGTAACTCCACAGCAACATCTTTGGGTCTAAAGGAAAGATGTGTGGCTGTTGACACTATATCGCTTGTTGCTCGAATATTGAATAGATCCAAAGCACATCTGCAGTCTATGCTTTTGCAAAGTAATGCAACTGTGCTTGAGGATTTTTATCAGCATCTGGTGGATGCTGTACCAGATCTTACAGAGCATATTCATAGGACAACAGCAAGACTACTACTGAACATTAATGGGTATGTTGAACGTATTGCCAGTTCTAAATGGGAAGTAAAAGAGCTTGGGATAGAGCATAATGGGTATGTTGATTTGTTGCTGGGAGAGTTTAAGCACTATAAAACACGACTTGCTCATGGGGGAATTCGTAAAGAGATTCAAGACCTACTGTTAGCGTATGGGCTTGAAATTGTGGCGGAAACTCTTGTAGAAGGACTTTCACGGGTGAAGAGATGTAGTGATGAAGGACGAGCTCTAATGTCATTGGATTTGCAGGTTTTGATCAATGGGCTGCATCATTTTGTGTCCATGAATGTGAAGCCCAAGCTGCAGATGGTTGAAACCTTCATTAAGGCTTACTACCTTCCAGAGACAGAATATGTGCACTGGGCACGTGCACACCCGGAATATTCGAAAAGTCAGATTATTGGGTTGATAAACCTTGTTGCTACTATGAAAGGATGGAGGAGAAAAACCAGGTTGGAAGTATTGGAAAAGATTGAATGA	3486	0.42	MIIIHYLSSSAVAVASMVTLFVPSLGSDRVSRSYPGARLILHPNNSSPNLFPFGSFQGNPFIFNGDLIEGFESSRVFFLVPFLLFQGGGMDLSKVGEKILSSVRTATTLGRLPSVSDRPEVPARAAAAAAVARALAGLPPHQRYSLSSSSEELSSIYGSRNNGQVVEELEDEFYEEDFDSVKYVLEHVPAEENELAYFEKLAALRLAQLDRVAEGLSRHVMEHHEVMVKGMNLVRELERDLRIANVICMNGRRHLTSSVNEVSRDLIVNSYSKKKQALLDVLPVLTELQRALDMQSALELLVEEGNYCKAFQVLSEFLQLLDSLSELSAIQEMSRGVEVWLGKTLQKLDALLVGVCQEFKEDGYITVTDAYALIGDITGLAEKIQSFFMQEVISGTHTVLKAIVFELHNCYFDNRLTYSDLCLQISESQFRQCLLRTLAVLFELMRSYHEIMEFQLDRQDAAAQTSNKYNEISYIPGRAGEVDADVGTCSNSLSSCGNEIRDSSSREEAARASSLVETTSSAGLPCIDSHDPVNEARKEDSAASSIESPWYHLRKEATAFVSQTLQRGRKNLWHLTTSRVSVLLSSDAACTTSIHQFLKNYEDLSIFILAGEAFCGIEAVEFRRKLKAVCENYFMAFHRQNVHALKLVLEKENWIKLPPDTVEIISFAGLVGDGAPLISSSNRQSVSASAVHSVQSHTSARKSGFSHWLRSGNPFLQKLSNSREGHCFSQSNGLTYGEFDGSSSNNFYGDKVLPGKNDSNQTNGADSVLEYENEDLLADFIDEDSQLPSRSSKPNHSRRKSLNCNGEENIAQTGSSLSLLRSMDKYARLMQKLEVVNVEFFKGICQLFEILFYFVYETFGQQNTSFSGKGSTDSLNYRLRTALSKTTQDCDQWIKPSSSSPTSLSQSFVHSEVTPANPPITNLGNSTATSLGLKERCVAVDTISLVARILNRSKAHLQSMLLQSNATVLEDFYQHLVDAVPDLTEHIHRTTARLLLNINGYVERIASSKWEVKELGIEHNGYVDLLLGEFKHYKTRLAHGGIRKEIQDLLLAYGLEIVAETLVEGLSRVKRCSDEGRALMSLDLQVLINGLHHFVSMNVKPKLQMVETFIKAYYLPETEYVHWARAHPEYSKSQIIGLINLVATMKGWRRKTRLEVLEKIE	1161

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bisa02g3596	1161	PANTHER	UNCHARACTERIZED	90	1161	IPR040047	GO:0032456\|GO:0042147\|GO:1990745
	Bisa02g3596	1161	Pfam	Protein of unknown function C-terminus (DUF2451)	931	1161	IPR019514	-
	Bisa02g3596	1161	Pfam	Protein of unknown function (DUF1005)	2	47	IPR010410	-
	Bisa02g3596	1161	Pfam	Vacuolar-sorting protein 54, of GARP complex	166	454	IPR019515	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bisa02g3596	Bisa-ChrBisa02	88360456	88383874	Transposed

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Bisa02g3596	02	88360456	88383874	Bisa02g3596	02	88360456	88383874	ECH