Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g3592 ATGGCGGTGACTTTTCCCGTTGGGGTTCTCATCGCCACCGTTGTGCTGTTTTCGTCAGCGACGGTGAATTGTGAATTTCCGATGACTCTAACGCTGGAAAGAGTGTTTCCGTCGAATAATGGAATGCAGATACGTCAGCTCAGGGCTTTGGACGACGCTAGACATCAAAGATTGCTGCTTCAATCTTCAAATGACTCTGATTTCCCACTTCGCGGCACCTATGATCCATTCGTATGCGGACTTTACTATACGAAGGTGCAATTGGGTTCTCCTCCAAGAGACTTTAACGTGCAAATTGACACGGGAAGCGATGCTCTTTGGGTTAGCTGTACCTCCTGTTCTGGTTGCCCTCGCAAAACTGAGCTCGAGGTAAAGCTTAACTCTTTCGATCCAGAGAATTCATCAACATGTTCAAAGCTATCCTCGAAAGGGTTAGTGCCAAAAACCTTCTCTCACTGCCTCAGAGGAGATGAACAAGGTGGAGGCAAGTTGGTTCTTGGTGAGATTTTGGACCCCAATCTAGTTTATACTCCACTGCTTTCAGACATGCCTCATTACTATATAGAAATGAAGAGTATAGAAGTGAAAGGAAAAAAGATACAAGTTGATTCATCAGTTTCAACAACATCAGACGACCATGGCGCCATTGTTGACTCTGGAACAACTATGACATATTTTCCAAAGGGGGTTTACGAGGCCCTTCTTGAAGAGATTATGAATGCAATTTCACAGGATTCTCTAATTGGCACATATAATATTGATGGGAGTCCATGTTTTCTAATCACTCGCAGCATCTCTGAAGTTTTTCCTAATGTAAGTCTGAGTTTTGCTGGTGGCGCATCTATGGTTTTGAGACCAAAGGACTACCTTTTAGTTGATAGATCAAGATCAAAAAGTGCTGGAGAATTAGAAGGGTGGTGTTTGGGCGTTCAGAAAATTGAAGGTCGAGATTTAATACTTTTAGGAGATATTGTATTGAAAGATAGAATTATAGTCTATGATTTAGCTCGCCAACGCCTTGGATGGGCTGATTATGACTTAGAAAAGTTGCCCTTCTCGCGTCTCTGTCGCACTAGCAGATCTGGTCGCCATCCTCGCGTGGTCTCTCGCTGTCGACACTGTCTGTCTTCTCCGTTGCCTCTCCGCTGCAGATCTGGTCTCTCCCGTCTCAGATCTGATATCTTCACCGTCGTAAATCCGTACTCCGTCTCTCCCTTCTCCGTCGAGTGGTCACGGAACTGTTTAAAGGAGTTGGTTGGGATGGTGCAATCAAAGGAGGACTCCTACTCTCAACCTCGTGCCCATGGAATGTATAGAAGTGTGTGTTTAGTAGATGAATAA 1341 0.4467 MAVTFPVGVLIATVVLFSSATVNCEFPMTLTLERVFPSNNGMQIRQLRALDDARHQRLLLQSSNDSDFPLRGTYDPFVCGLYYTKVQLGSPPRDFNVQIDTGSDALWVSCTSCSGCPRKTELEVKLNSFDPENSSTCSKLSSKGLVPKTFSHCLRGDEQGGGKLVLGEILDPNLVYTPLLSDMPHYYIEMKSIEVKGKKIQVDSSVSTTSDDHGAIVDSGTTMTYFPKGVYEALLEEIMNAISQDSLIGTYNIDGSPCFLITRSISEVFPNVSLSFAGGASMVLRPKDYLLVDRSRSKSAGELEGWCLGVQKIEGRDLILLGDIVLKDRIIVYDLARQRLGWADYDLEKLPFSRLCRTSRSGRHPRVVSRCRHCLSSPLPLRCRSGLSRLRSDIFTVVNPYSVSPFSVEWSRNCLKELVGMVQSKEDSYSQPRAHGMYRSVCLVDE 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g3592 446 Pfam Xylanase inhibitor C-terminal 185 343 IPR032799 -
Bisa02g3592 446 Pfam Xylanase inhibitor N-terminal 82 141 IPR032861 -
Bisa02g3592 446 SUPERFAMILY Acid proteases 78 347 IPR021109 -
Bisa02g3592 446 Gene3D Acid Proteases 78 143 IPR021109 -
Bisa02g3592 446 PANTHER ASPARTYL PROTEASES 15 141 IPR001461 GO:0004190|GO:0006508
Bisa02g3592 446 ProSiteProfiles Peptidase family A1 domain profile. 1 343 IPR033121 -
Bisa02g3592 446 PRINTS Pepsin (A1) aspartic protease family signature 88 108 IPR001461 GO:0004190|GO:0006508
Bisa02g3592 446 PRINTS Pepsin (A1) aspartic protease family signature 319 334 IPR001461 GO:0004190|GO:0006508
Bisa02g3592 446 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 215 226 IPR001969 GO:0004190|GO:0006508
Bisa02g3592 446 Gene3D Acid Proteases 144 360 IPR021109 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g3592 Bisa-ChrBisa02 88200182 88212959 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g3592 138 351 Miscellaneous Gene Families AT1G44130 26.991 9.04e-17 80.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa12g1149 12 19346053 19350718 Bisa02g3592 02 88200182 88212959 CCT