Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g3581 ATGGCTGAAGCCGAACCCAAATTCTTCATACCAGAGTCAATCCATGGGGTGACTAACGACGTCGCCGGACAGATTAAGCTGATATGGGACGTCATCAAGGCGCCATTGATAGTGCCTCTTCTGAATCTCGGAGTCTACATTTGCTTGGCCATGTCTCTCATGCTCTTCATGGAGAGGCTGTACATGGGTGTCGTCATCATTCTCGTCAAGCTCTTCTGGAAAAAACCAGAGCAACGTTACAGATACGAGCCAATCCAAGACGACCCCGAATTGGGATCCACCAATTTCCCTGTCGTTCTCGTCCAAATCCCAATGTTCAATGAAAGAGAGGTTTACAAGGTCTCCATTGGAGCAGCTTGTAACCTTTCATGGCCTTCCGACCGCCTCGTCATTCAAGTCCTCGATGACTCCACCGACCTCACCGTCAAGCAAATGGTCGAGCAAGAGTGCCTGAGATGGGCGAGCAAGGGCCTTAACATAACGTACCAAATCAGAGAGAACAGAACAGGTTACAAAGCAGGAGCATTGAAGGAAGGGCTAAAGCGAAACTACGTGAAACACTGCGAGTACGTGGCCATTTTCGACGCCGATTTCCGGCCGGAGCCGGACTTTCTCCGGCGAGCCATTCCCTTCTTGGACGGCAACCCCGATCTCGCTCTGGTTCAAGCTCGCTGGAGATTCGTGAATGCAAACGAATGCTTGTTGACAAGAATGCAAGAGATGTCTCTGGATTACCATTTCAAAGTGGAGCAAGAAGTTGGGTCAGCCACGCATGCTTTCTTTGGTTTCAATGGCACAGCAGGTGTATGGAGAATTGCCGCAATCAATGAAGCAGGAGGCTGGAAAGACAGAACAACTGTGGAGGACATGGATCTTGCCGTTCGTGCTAGCCTTAGAGGCTGGAAATTTCTATATCTTGGAGACCTCCAGGCGAAAAGTGAGCTTCCCAGTACATTAAGAGCCTTCCGCTTCCAGCAGCATCGATGGTCTTGTGGTCCTGCTAATCTGTTCCGCAAGATGGTGATGGAGATTGTACGGAACAAGAAAGTGAAGTTCTGGAAGAAAGTGTATGTGATATACAGCTTCTTTTTCGTGCGTAAAATCATAGCCCACATGGTGACCTTCTTCTTCTACTGTGTGGTGCTTCCCCTCACCATTTTGGTCCCTGAGGTCCATGTTCCTATATGGGGAGCTGTTTACATTCCTTCCATCATCACCATCCTCAACTCTGTGGGAACTCCAAGGTCCATTCACCTTTTGTTCTACTGGATCCTCTTTGAGAATGTCATGTCTCTGCATCGTACCAAGGCAACCTTCATTGGTCTGCTTGAAGCTGGAAGAGCCAATGAGTGGGTTGTCACTGAAAAACTTGGAGACTCTGTCAAGAACAAAGCAGATGCCACCAAGAACAAGATAAACCTCCCCAAAGCAACCAAAAAACCTCGACTCAGAATTAGCGAAAGGTTTAATTTACTAGAGCTGGGATTTGCAGCCTTCCTGTTCTTGTGTGGATGCTATGATTTTGTGCATGGGAAGAACAACTACTTCATCTACCTCTTCCTTCAAACCATAACGTTCTCGATTGTAGGATTTGGCTATGTCGGGACCATCGTTTGA 1617 0.4793 MAEAEPKFFIPESIHGVTNDVAGQIKLIWDVIKAPLIVPLLNLGVYICLAMSLMLFMERLYMGVVIILVKLFWKKPEQRYRYEPIQDDPELGSTNFPVVLVQIPMFNEREVYKVSIGAACNLSWPSDRLVIQVLDDSTDLTVKQMVEQECLRWASKGLNITYQIRENRTGYKAGALKEGLKRNYVKHCEYVAIFDADFRPEPDFLRRAIPFLDGNPDLALVQARWRFVNANECLLTRMQEMSLDYHFKVEQEVGSATHAFFGFNGTAGVWRIAAINEAGGWKDRTTVEDMDLAVRASLRGWKFLYLGDLQAKSELPSTLRAFRFQQHRWSCGPANLFRKMVMEIVRNKKVKFWKKVYVIYSFFFVRKIIAHMVTFFFYCVVLPLTILVPEVHVPIWGAVYIPSIITILNSVGTPRSIHLLFYWILFENVMSLHRTKATFIGLLEAGRANEWVVTEKLGDSVKNKADATKNKINLPKATKKPRLRISERFNLLELGFAAFLFLCGCYDFVHGKNNYFIYLFLQTITFSIVGFGYVGTIV 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g3581 538 PANTHER GLUCOMANNAN 4-BETA-MANNOSYLTRANSFERASE 9 22 536 - -
Bisa02g3581 538 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 88 316 IPR029044 -
Bisa02g3581 538 Pfam Glycosyl transferase family group 2 190 399 IPR001173 -
Bisa02g3581 538 SUPERFAMILY Nucleotide-diphospho-sugar transferases 93 378 IPR029044 -
Bisa02g3581 538 FunFam Glucomannan 4-beta-mannosyltransferase 9 88 316 - -
Bisa02g3581 538 CDD CESA_CaSu_A2 97 333 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g3581 Bisa-ChrBisa02 87950118 87953881 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g3581 1 538 Miscellaneous Gene Families AT5G22740 81.041 0.0 911
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa02g3581 02 87950118 87953881 Bisa02g3581 02 87950118 87953881 ECH
Bisa03g3608 03 73912479 73920566 Bisa02g3581 02 87950118 87953881 ECH
Bisa07g2306 07 52662845 52668386 Bisa02g3581 02 87950118 87953881 ECH