Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g3499 ATGGGAAGTCCTTTCTTTGAAAATGTTGTTATCATCAGGCTTGAAGGGAAGGTGGCTCTGATCACTGGTGGCGCAAGTGGGATTGGCGAGTGCACTGCGAGGCTCTTCTCCAAGCACGGAGCTAAAGTGGTAATTTCCGACATCGTTGACGACAAGGGTCACTCTGTTTGCAAAGACCTAACCAATTCATCGTCATCGTCAACCTCTGCTTCGTATGTCCACTGCGATGTCACAAACGAAAGGGACATAGAAAACGCAGTGAACACGGCGGTCTCCAAGCACGGCAAGCTAGACATAATGTTCAACAACGCCGGCATATCCGGCGTCAACAAACCCAGCATCGTCGACAATAAGAAATCCGAATTCGAGGAAGTAATCAACGTGAATTTAACAGGGGCATTTCTGGGAACGAAGCACGCAGCGAGGGTGATGATTCCTGCACGACGTGGCAGCATAATAACGACGGCGAGTGTGTGTGGAATCATAGGCGGTGTGGCGTCACACGCGTACACGTGTTCGAAGCATGCGGTGGTGGGGCTGACGAAGAACACGGCGGTGGAGCTGGGACAATATGGGATAAGGGTGAATTGTGTGTCGCCGTACGTGGTGGCCACACCAATGGCTAAGGATTACTTCAAGCTTGACGATGAGGGGATTGTTGGGGTTTATTCGAATCTAAAGGGGCCTACTCTAGAAGCGGCGGATGTGGCTGAGGCTGTGCTCTACTTGGCGAGTGAGGAGTCCAAGTATGTGAGTGGACACAATATCGTGGTTGATGGAGGATTCACTGTTGTCAACTCTGGCTTTTGTACCTTGGGGAAATGA 825 0.5091 MGSPFFENVVIIRLEGKVALITGGASGIGECTARLFSKHGAKVVISDIVDDKGHSVCKDLTNSSSSSTSASYVHCDVTNERDIENAVNTAVSKHGKLDIMFNNAGISGVNKPSIVDNKKSEFEEVINVNLTGAFLGTKHAARVMIPARRGSIITTASVCGIIGGVASHAYTCSKHAVVGLTKNTAVELGQYGIRVNCVSPYVVATPMAKDYFKLDDEGIVGVYSNLKGPTLEAADVAEAVLYLASEESKYVSGHNIVVDGGFTVVNSGFCTLGK 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g3499 274 Pfam Enoyl-(Acyl carrier protein) reductase 23 263 - -
Bisa02g3499 274 CDD secoisolariciresinol-DH_like_SDR_c 13 263 IPR045309 GO:0016616
Bisa02g3499 274 ProSitePatterns Short-chain dehydrogenases/reductases family signature. 157 185 IPR020904 GO:0016491
Bisa02g3499 274 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 15 265 IPR036291 -
Bisa02g3499 274 Gene3D - 10 272 - -
Bisa02g3499 274 PRINTS Glucose/ribitol dehydrogenase family signature 144 160 IPR002347 -
Bisa02g3499 274 PRINTS Glucose/ribitol dehydrogenase family signature 170 189 IPR002347 -
Bisa02g3499 274 PRINTS Glucose/ribitol dehydrogenase family signature 18 35 IPR002347 -
Bisa02g3499 274 PRINTS Glucose/ribitol dehydrogenase family signature 226 246 IPR002347 -
Bisa02g3499 274 PRINTS Glucose/ribitol dehydrogenase family signature 95 106 IPR002347 -
Bisa02g3499 274 PRINTS Glucose/ribitol dehydrogenase family signature 191 208 IPR002347 -
Bisa02g3499 274 FunFam Short-chain dehydrogenase reductase 1 267 - -
Bisa02g3499 274 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 150 158 IPR002347 -
Bisa02g3499 274 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 95 106 IPR002347 -
Bisa02g3499 274 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 170 189 IPR002347 -
Bisa02g3499 274 PANTHER 3-OXOACYL-(ACYL-CARRIER-PROTEIN) REDUCTASE (AFU_ORTHOLOGUE AFUA_6G11210) 13 266 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g3499 Bisa-ChrBisa02 86570707 86571706 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g3499 13 264 Acyl Lipid Metabolism Gene Families AT3G46170 35.385 1.08e-35 127
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa02g3499 02 86570707 86571706 Bisa02g3499 02 86570707 86571706 ECH