Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g3333 ATGGAGAAATCAAAGTTGCCGTTTATAACTATTGACTTTCATCTAATCGTTGGAGTACCGAAGAGAAATCAACCTCACCATCGACATGCCACGTGTCATTACGCTATCGGATCCTTCGAAAATTCACAAAAATTTCAGTTTCACACTCTGGATAAGCTTTTTCTTTTATTCCTTTCTGTGATCTCCTTTTCCCACACAAACAAAACTTTCGAAAACAAATGCACCTTCCTCTTTGACCTTTCTCTTCCTAATCAAACCGACTATGCTGCAAAATTTATGAGTCTGATTGTCTCAGCTCACTCTCTTCCTTTGCAGTTTCCTCCAATGACCGCCGTTACTTCTTTGTCTTTCTCAGCATTAAGTCAATGCTCTGAAAGAAAACTAGCTGTCCCTTCCGCTCGCCCTCTCGGATTCAATTCCGAGGCGTTTCGGTTTCGGACGAATATTTTGTATCAATATGTAGGTGTGCGAGCTTCCAATTCGACTTCTAGAATGGTTATTCAATGCATGTCTTCTGCGACAGACATTCCCACTGTTTCTGAGACAAAGTTAAATTTTCTCAAGGCATATAATCGACCAATCCCTAGTATCTACAACAGTGTGCTGCAGGAGCTCATTGTCCAGCAGCACTTAATGAGATACAAGAGATCATATCGTTATGACCCTGTATTTGCACTTGGTTTTGTCACTGTATATGATCAACTGATGGATGGGTATCCTAGTGATGAAGATCGAGATGTCATCTTCCAAGCATATATTAAGGCCCTGAAGGAAGAGCCAGAGCAATACAGATTAGATGCACAGAAATTGGAAGAGTGGGCTCGGGCTCAGAATCCAACTTCCTTGGTGGAGTTTTCTTCCAGAGAAGGGGAAGTTGAGGGGATATTAAAGGATATTGCAGAAAGAGCAGGGGGAAAGGGTGATTTCAGTTATAGTCGTTTCTTTGCAGTAGGCCTCTTTCGACTTCTTGAGCTGGCAAATGCAACAGAACCAACAATTTTGGAAAAGCTTTGCGCAGCTCTGAACATTAACAAAAGAAGTGTTGATCGTGATTTGGATGTGTACCGTAATCTGCTTTCAAAGTTGGTTCAGGCAAAAGAGCTGCTAAGGGAATATGTTGACAGGGAGAAGAAGAAAAGAGAAGAAAGGACTGAATCTCAGAAGGCTAATGAGGCCGTTTCAAAATGTTTGAGACAAAATATCAATTTACTCGCGTGTATACGTTACGGTAGTTCTAATGAAACGATCCCTCAGTGA 1257 0.4145 MEKSKLPFITIDFHLIVGVPKRNQPHHRHATCHYAIGSFENSQKFQFHTLDKLFLLFLSVISFSHTNKTFENKCTFLFDLSLPNQTDYAAKFMSLIVSAHSLPLQFPPMTAVTSLSFSALSQCSERKLAVPSARPLGFNSEAFRFRTNILYQYVGVRASNSTSRMVIQCMSSATDIPTVSETKLNFLKAYNRPIPSIYNSVLQELIVQQHLMRYKRSYRYDPVFALGFVTVYDQLMDGYPSDEDRDVIFQAYIKALKEEPEQYRLDAQKLEEWARAQNPTSLVEFSSREGEVEGILKDIAERAGGKGDFSYSRFFAVGLFRLLELANATEPTILEKLCAALNINKRSVDRDLDVYRNLLSKLVQAKELLREYVDREKKKREERTESQKANEAVSKCLRQNINLLACIRYGSSNETIPQ 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g3333 418 Hamap Protein Thf1 [thf1]. 173 381 IPR017499 GO:0010207|GO:0015979
Bisa02g3333 418 Pfam Thylakoid formation protein 178 383 IPR017499 GO:0010207|GO:0015979
Bisa02g3333 418 Coils Coil 355 385 - -
Bisa02g3333 418 PANTHER PROTEIN THYLAKOID FORMATION 1, CHLOROPLASTIC 109 400 IPR017499 GO:0010207|GO:0015979
Bisa02g3333 418 NCBIfam photosystem II biogenesis protein Psp29 175 380 IPR017499 GO:0010207|GO:0015979
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g3333 Bisa-ChrBisa02 83191364 83195778 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa12g0912 12 14884134 14888260 Bisa02g3333 02 83191364 83195778 CCT
Bisa02g3333 02 83191364 83195778 Bisa02g3333 02 83191364 83195778 ECH