Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g3304 ATGGATGAGACTTCTGAACTGTCCATTCAATTGATTAGACTTCCACCTCCTTTTCCACGAGGTGCCCTATCTCAGTGTGGAGATCCCCTCTTGGCTGCTGTGTCTCCTTCCTTCCGCATCTGCTGTGGGTTGCAGTCAGATTCATCGTCGAGGAAGCTTTCAGTGGGCTTCCTCAGTTCTCTGATTCCCGACCAGCGACGCCCACTTGCAGAATTATATTCACAACTACACCCACCACCTTCAACGCCAACCAAACCCTCCTTGATGGAACCAATTATGAACTGCACCAATGGCAGCCATGGCTACGATATCATAAGCTGGTTGGAAGATGCGACCAAGAACGCAGGCTCTACTCAGACCCAGATGCTATCCCAGATTCTGAAGCAGAACCATGGAGTGGAATACCTCAAGAAATGGCTCGGGGACTACAATATCCAACACGTGGATGACTGTGCATTGGAATCCCTTTTTACTTCTGTGGTTCCCCTTGCCTCACACGCAGATTTCGAGCCCTTTATCCAAAGAATTGCGGATGGGGACACTGGCCCTTTACTCACTCAGCAACCCATAACCACTCTTTCCTTGAGTTCAGGAACCACAGAGGGAAGGCAAAAGTTTGTACCTTTTACCCGTCACAGCGCGCAAACTACCCTTCAAATCTTCACTCTAGCAGCAGCATATAGATCAAAAGTTTATCCCACGAGAGAAAGAGGGAGGGCTCTGGAATTCATATACAGCAGTAAGCAGTTCAAAACAAAAGGAGGCTTAACTGTAGGAACAGCCACAACACACTTCTACGGAAGTCAAGAGTTCAGAATCAAGCAAGAGAAAACGATGTCGTTTACTTGCAGTCCAGATGAGGTGATCTCAGGTGGAGACTACAAACAAGTCACATACTGCCACCTCGTCCTTGGTCTCTTCTTCTCTGAAGAAATAGAGTACATATCATCAGCCTTTGTGTACAGCATAGTCCAAGCCTTTCGCAGTTTCGAAGATCTGTGGAGAGAAATATGTAATGACATCAAAAACGGTACTCTGAGTTCGAGAATCAAGATACCCAGAATGAGAAATTCTGTTCTGGAGATTCTCTCTTCTCCAAGCCCATCTCTGGCTTCAAAACTGGAAGCTAAATGCCAAGAGCTAGAACTGGTGAACTGGTCTGGTTTGATTCCTAAGCTGTGGCCAAATGCTAAGTATGTGTATGCCATAATGACAGGGTCAATGGAGCCATATTTGAAGAAGCTGAGGCATTATGCAGACGGGTTGCCATTAGTGAGTGCTGATTATGGATCTACAGAGAGCTGGATAGGGGTTAATGTGGATCCTGGTTTGCCTCCTGAGAAAGTCACATTTGCTGTAGTGCCCACTTTCTCTTACTTTGAGTTCATACCACTTCACAGATCACAGAAATCACAGGATTTCAGTTTGGTTAGTGACGATTACGTTGAGGATAAGCCAATCCCACTTTCCCAGGTTGAAGTTGGACAAGAGTATGAAGTAGTCCTCACCACTTTCACTGGTCTTTATAGGTGTAGACTAGGGGACGTGGTGGAAGTGGCGGGGTTCCACAATCAGACTCCAAAGCTAAAATTCGTGTGCAGAAGGAAGCTGATATTAACAATAAACATCGACAAGAACACGGAGAAGGACGTACAGGTGGCGGTGGAGAAGGGGTCGCAGCTCCTAAACAGATTGCAGAGAAAAGCGGAGCTGGTGGACTTCACGAGCTACGCTGAGGTGTCGGAGCAGCCGGGGCACTACGTGATATTCTGGGAAGTGAAGGGGGAGGTGGAGGAGGAGGTTCTGGAAGAGTGTTGCAGGGCGATGGACGAGGGGTTCAAGGACCATGGGTACGTGGTGTCCAGGAAGACCAACTCCATAGGGCCTCTGGAGCTGTGCTTGGTGGAGACTGGAACCTTCAGGAAGATTCTGGATTATTTTGTGGCCAATGGGGCTGCTTTGAGCCAGTTCAAGACCCCTCGCTGCACTTCTAATCAGCTTTTGCTTAACATTCTTCATGCAAACACCCTTAACACTGTTCGCAGCTCTGCTTATACTTCCCAACATTTAGATAACTAG 2079 0.4752 MDETSELSIQLIRLPPPFPRGALSQCGDPLLAAVSPSFRICCGLQSDSSSRKLSVGFLSSLIPDQRRPLAELYSQLHPPPSTPTKPSLMEPIMNCTNGSHGYDIISWLEDATKNAGSTQTQMLSQILKQNHGVEYLKKWLGDYNIQHVDDCALESLFTSVVPLASHADFEPFIQRIADGDTGPLLTQQPITTLSLSSGTTEGRQKFVPFTRHSAQTTLQIFTLAAAYRSKVYPTRERGRALEFIYSSKQFKTKGGLTVGTATTHFYGSQEFRIKQEKTMSFTCSPDEVISGGDYKQVTYCHLVLGLFFSEEIEYISSAFVYSIVQAFRSFEDLWREICNDIKNGTLSSRIKIPRMRNSVLEILSSPSPSLASKLEAKCQELELVNWSGLIPKLWPNAKYVYAIMTGSMEPYLKKLRHYADGLPLVSADYGSTESWIGVNVDPGLPPEKVTFAVVPTFSYFEFIPLHRSQKSQDFSLVSDDYVEDKPIPLSQVEVGQEYEVVLTTFTGLYRCRLGDVVEVAGFHNQTPKLKFVCRRKLILTINIDKNTEKDVQVAVEKGSQLLNRLQRKAELVDFTSYAEVSEQPGHYVIFWEVKGEVEEEVLEECCRAMDEGFKDHGYVVSRKTNSIGPLELCLVETGTFRKILDYFVANGAALSQFKTPRCTSNQLLLNILHANTLNTVRSSAYTSQHLDN 692
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g3304 692 Pfam GH3 auxin-responsive promoter 107 665 IPR004993 -
Bisa02g3304 692 PANTHER GH3 DOMAIN-CONTAINING PROTEIN 104 685 IPR004993 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g3304 Bisa-ChrBisa02 82658604 82666605 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g3304 103 683 EF-hand Containing Proteins AT1G23160 35.126 3.99e-123 377
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa12g0877 12 14399229 14403534 Bisa02g3304 02 82658604 82666605 CCT
Bisa02g3304 02 82658604 82666605 Bisa02g3304 02 82658604 82666605 ECH