Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g3120 ATGCAGCTTCACATATCCCCAAATTTGAGGCAAGTCACCGTGTTTCCTGGGAAAGGGTTCAAAGAGTTCATGAAAGTGAAGGTTGCGTCAAGGAGGGTTTCGTATAGGATGCTCTTCTATTCCCTCTTGCTCTTCACTTTCCTCCTTCGCTTTGTGTTTGTGTTGACTGCTGTGGACACCATTGATGGAGATTTCAAGTGCTCTACCATTGGTTGCCTGGGGAAGAAAATAGGACCAAAGATTCTGGGAAGAAAGGTTGAATCAAATGTCCCAGAAGTGATATACAGAATATTAGATGAACCTGTTGACAAAGATGAAGTGGAGGGAAGATCACATATTCCACAGACATTAGAGGAATTCATGACTGAAATGAAAGAAGGTGGATATGATGCCAAGACATTTGCTACTAAACTCAGAGAAATGGTCATTCTCATGGAACAAAGGACCAGGACAGCCAAAATCCAAGAATACCTGTATCGCCATGTAGCCTCAAGCAGCATACCCAAACAGCTTCACTGCCTAGACCTGAGGCTGGCCAGTGAGCACACCAACAATGCCTTAGCTCGCCTTCAGCTTCCTTCTGCAGAACTAGTCCCTGCCTTGGTTGACAACTCCTACTTCCACTTTGTTCTTGCCTCAGACAATGTTCTGGCTGCTTCTGTGGTTGCAACCTCCCTCGTCCGAAACTCCCGGCGACCCAACAAGGTGGTTCTGCACATAATCACAGACAGAAAGACTTACTATCCCATGCAGGCTTGGTTCTCACTGCACCCTCTGTCATCTGCTATAATTGAGGTCAAGGCATTGCACCATTTTGATTGGCTCACAAAGGGAAAGGTGCCTGTTCTGGAAGCAATGGAGAAAGATCAACGAGTGAGGTCACAGTTCAGAGGGGGATCATCAGCTATTGTTGCAAATAATGTTGAGAACCCATATGTTGTTGCAGCTAAGCTCCAGGCACTTAGTCCCAAGTATAACTCAGTGATGAACCACATAAGGATACATCTTCCAGAGTTGTTCCCAAGTCTCAACAAGGTGGTCTTCCTAGATGATGATGTTGTGGTACAAACTGATCTTTCACCCCTGTGGGAAATTGAAATGACTGGAAAAGTAAATGGAGCAGTAGAAACGTGTACTGGAGAAGACAAGTTTGTGATGTCAAAGAGATTGAAAAGCTATTTGAACTTCTCCCACCCCCTGATAGCCGAGAATTTCGACCCTGATGAATGTGCTTGGGCTTATGGCATGAACATTTTTGATCTGGAGGCTTGGAGGAAGACCAACATAAGCCTTACATACCATTATTGGGTTGAGCAGAATATAAAATCAGACCTGAGTTTATGGCAGCTAGGGACATTACCTCCTGGATTGATAGCATTCCATGGTCACGTCCACATAATTGATCCTTTCTGGCACATGCTGGGGTTGGGATATCAAGAGAATACAAGTTTTTCTGATGCTGAGAGTGCTGGTGTCATCCATTTTAATGGCAGGGCAAAGCCATGGCTAGATATAGCTTTTCCAAAGCTAAGGCTATTGTGGGCTAAATATGTTGACTTTTCAGACAAGTTCATCAAGAGCTGTCATATCAGAGCATCATAA 1602 0.4444 MQLHISPNLRQVTVFPGKGFKEFMKVKVASRRVSYRMLFYSLLLFTFLLRFVFVLTAVDTIDGDFKCSTIGCLGKKIGPKILGRKVESNVPEVIYRILDEPVDKDEVEGRSHIPQTLEEFMTEMKEGGYDAKTFATKLREMVILMEQRTRTAKIQEYLYRHVASSSIPKQLHCLDLRLASEHTNNALARLQLPSAELVPALVDNSYFHFVLASDNVLAASVVATSLVRNSRRPNKVVLHIITDRKTYYPMQAWFSLHPLSSAIIEVKALHHFDWLTKGKVPVLEAMEKDQRVRSQFRGGSSAIVANNVENPYVVAAKLQALSPKYNSVMNHIRIHLPELFPSLNKVVFLDDDVVVQTDLSPLWEIEMTGKVNGAVETCTGEDKFVMSKRLKSYLNFSHPLIAENFDPDECAWAYGMNIFDLEAWRKTNISLTYHYWVEQNIKSDLSLWQLGTLPPGLIAFHGHVHIIDPFWHMLGLGYQENTSFSDAESAGVIHFNGRAKPWLDIAFPKLRLLWAKYVDFSDKFIKSCHIRAS 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g3120 533 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 209 525 IPR029044 -
Bisa02g3120 533 Pfam Glycosyl transferase family 8 210 506 IPR002495 GO:0016757
Bisa02g3120 533 SUPERFAMILY Nucleotide-diphospho-sugar transferases 208 530 IPR029044 -
Bisa02g3120 533 PANTHER GALACTURONOSYLTRANSFERASE 4-RELATED 85 530 IPR029993 GO:0047262
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g3120 Bisa-ChrBisa02 79070875 79074994 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g3120 1 533 Glycosyltransferase AT5G54690 79.252 0.0 874
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa12g0695 12 11002284 11005618 Bisa02g3120 02 79070875 79074994 CCT
Bisa02g3120 02 79070875 79074994 Bisa02g3120 02 79070875 79074994 ECH