Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g2593 ATGGATGGTTATGAAGCTACAAGGATTGTGTTCTCGCGGATCCAAAACTTGGACCCTGAAAATGCCTCCAAAATCATGGGTCTGCTTCTGATTCAAGACCATGGCGAGAAGGAGATGATAAGATTAGCATTTGGCCCCGAAGCTCTGGTTCACTCTGTGATTCTCAAAGCTCGGAAAGACTTGGGTTTATCTTCCAATCTTCCTCCCCCTCCTCCTCCACCTCCTCCTCCGTCATCTTCATCTTCATCTCCATCTCCATCTCCATCTCCTTTCCTCCCGAGGCAAAATTCTACTCCTTCCAGACTCCTTCCTCCTGCTCTCACCATCCCAAACTCTGCTTCTTCAGCCTCTTGGGGTGATGACTTGATGAGCCCCAACAACTTACTAGTTGGCTCTAATTCTTCTCATATCAACATTCCGTCACCTTCCTCTTCGTTACCCTTCTACGGGTCTGATCCAATTGACGATTTTCAACTTCAGGACCAGCTTTCTTTCCTCAATGATGGGTCTCCCCGGAAATACCCTGATTTGTTCTACCCTCAATCCGACTTATCTTCGAGTCCGAGTGCCGGCGCCGGCAGCATTTTTCCGTCATACGGATGGGGCGGGTCGGTTCATCGCCGGAGCTGCTCCGTCAACGATGCGTGTTTGGGGTCGGAGGATCCGAATTCTGGGCTAGGATGGAAGCCCTGCATGTATTTTGCTAGAGGGTACTGCAAAAATGGTGCTAGTTGCAGGTTCCTTCATGGAGGAGGGATTGGAGATTCTGATGGTGCTTCAATAGTTGGGTCTCCGAGTAAGATTGAGATGATGGACCAAAGCAGCCATGAGCTTCTCAGATCTAAAACTGCTCAACATCAGAGATTGCTCATGGCTGCTTCTTTTCCTTACTCTCCGAAGTCCATGAATTTCCTACTGCAACAGCAACAGAATGACTCTCAAAGAGCACTCATGATGAACGAGGATTTCCACAAGTTTGGGCGATCCAGGCTTGAAAGGAACGATTTTTCTTCTCTTTCTGGAATTGGAAACCCAGCTTCGAGGCAGATCTACTTGACATTCCCTGCCGATAGCACTTTCAGAGAGGATGATGTTTCAAACTACTTCAGCATTTATGGGCCTGTTCAAGACGTGAGGATCCCATACCAGCAGAAGCGAATGTTTGGGTTTGTGACTTTCGTTTATCCAGAGACTGTGAAGCTCATTCTGTCCAAAGGAAACCCTCATTTCGTTTGTGACGCTCGTGTGCTGGTCAAGCCTTACAAGGAAAAAGGCAAAGTTCCGGACAAGTACAGGAAGCAGCAGCAAGCGGAAAGGGGTGATTTTTCACCATGTGGTACTCCCACTGGACTAGATGCTAGAGACCCATTTGATCTCCAACTTGGAGGAAGAATGTACTATAACACTCAAGATATGCTGTGGAGGAGGAAGCTAGAGGAGCAATCTGATTTGAAGCAAGCTCTTGAGCTTCAAAGTAGAAGGCTAATGGGTCTGCAACTTCTTGACATCAAGAAGCAGCATCAAAGAGCATTTTCCTCCGGAAGTCCAATTCCTTCGCCTACCCACTCTCCAAACATGTTCAATCAGAACCTCGTTCTTCCTCCCTTTCATGCTGGCAGCTTGGAGCCGGCCCCAGAGGAGAGTGTTCTAAGCTCTGCTCCTGCTAGCACTGCGCTGAGTCCTGTGGTTCAGCAGCAGCCATTACAGCCGAAGGTCAAGATCTCTGCCAGCACGAATGGAGGTGTAGGTGGTGGTGGCAACAGTAATAAGCAGAGCTCGACTCAGGAAGACTGTAATTTGCAAGAATGTTTGGAGCATAATCTCCCTGATAGCCCTTTTGCTTCGCCCACAAAAGCTGGAGACTACATGGCTGCCTTCTCCAATGGAGGACCAAATGAGGCCATTGATTCAGATGCATCTGCCACCTCTGAATTTGGTCCTACCTCTGCATTTCTTCCACCACCTTCTGCTCTTGACATGACCTCTTTCAAGTCCTTTAACTGTCAGTTACCAAGGTTCTCGTCTAGCCATGGAACCATTGAGATCTTCAGGAAGAGAGAAGTATGTTTGTGTGACCAAACAAGACCAGGAACAAGAAACAAATCTATAGAGAATCACCACCACCACCACCAAGGTCATCTATCACCATCATCATCATCAATACTATACTACTTACTACCATACAAAATGCATACGTAA 2199 0.4757 MDGYEATRIVFSRIQNLDPENASKIMGLLLIQDHGEKEMIRLAFGPEALVHSVILKARKDLGLSSNLPPPPPPPPPPSSSSSSPSPSPSPFLPRQNSTPSRLLPPALTIPNSASSASWGDDLMSPNNLLVGSNSSHINIPSPSSSLPFYGSDPIDDFQLQDQLSFLNDGSPRKYPDLFYPQSDLSSSPSAGAGSIFPSYGWGGSVHRRSCSVNDACLGSEDPNSGLGWKPCMYFARGYCKNGASCRFLHGGGIGDSDGASIVGSPSKIEMMDQSSHELLRSKTAQHQRLLMAASFPYSPKSMNFLLQQQQNDSQRALMMNEDFHKFGRSRLERNDFSSLSGIGNPASRQIYLTFPADSTFREDDVSNYFSIYGPVQDVRIPYQQKRMFGFVTFVYPETVKLILSKGNPHFVCDARVLVKPYKEKGKVPDKYRKQQQAERGDFSPCGTPTGLDARDPFDLQLGGRMYYNTQDMLWRRKLEEQSDLKQALELQSRRLMGLQLLDIKKQHQRAFSSGSPIPSPTHSPNMFNQNLVLPPFHAGSLEPAPEESVLSSAPASTALSPVVQQQPLQPKVKISASTNGGVGGGGNSNKQSSTQEDCNLQECLEHNLPDSPFASPTKAGDYMAAFSNGGPNEAIDSDASATSEFGPTSAFLPPPSALDMTSFKSFNCQLPRFSSSHGTIEIFRKREVCLCDQTRPGTRNKSIENHHHHHQGHLSPSSSSILYYLLPYKMHT 732
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g2593 732 MobiDBLite consensus disorder prediction 427 453 - -
Bisa02g2593 732 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 230 250 IPR000571 GO:0046872
Bisa02g2593 732 Gene3D - 219 305 - -
Bisa02g2593 732 PANTHER RNA-BINDING (RRM/RBD/RNP MOTIFS) 1 619 - -
Bisa02g2593 732 FunFam zinc finger CCCH domain-containing protein 53-like isoform X2 355 426 - -
Bisa02g2593 732 MobiDBLite consensus disorder prediction 62 106 - -
Bisa02g2593 732 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 348 424 IPR000504 GO:0003723
Bisa02g2593 732 MobiDBLite consensus disorder prediction 65 93 - -
Bisa02g2593 732 SUPERFAMILY CCCH zinc finger 228 250 IPR036855 GO:0046872
Bisa02g2593 732 ProSiteProfiles Zinc finger C3H1-type profile. 225 252 IPR000571 GO:0046872
Bisa02g2593 732 SMART c3hfinal6 227 251 IPR000571 GO:0046872
Bisa02g2593 732 MobiDBLite consensus disorder prediction 576 596 - -
Bisa02g2593 732 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 360 405 IPR000504 GO:0003723
Bisa02g2593 732 SMART rrm1_1 349 419 IPR000504 GO:0003723
Bisa02g2593 732 SUPERFAMILY RNA-binding domain, RBD 360 441 IPR035979 GO:0003676
Bisa02g2593 732 Gene3D - 347 444 IPR012677 -
Bisa02g2593 732 CDD RRM_AtC3H46_like 350 419 IPR034365 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g2593 Bisa-ChrBisa02 65765570 65768874 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa02g2593 02 65765570 65768874 Bisa02g2593 02 65765570 65768874 ECH