Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g2027 ATGAGCGACGATTTGATGGAAAAAGTCAGCGCCTTAGGAGAACGTCTGAAAATTGGTGGGAGTGAGGTGGGTCGAAAGATGAGTGCAGGCATGAGTTCTGTGAGCTTTAAGATGAAGGAGTTTTTTCTGGGTGCAAGCCAAGCTGATAAGCTTGTTGAGGATGCTACCTCTGATGGCCTTGATGAGCCTGATTGGGCTATGAACCTTGAGCTTTGTGACATGATCAATAATGAGAGAGTCAATAGTGTTGAAGTGATCTGTGCAATAAAGAGGCGGATTGCGTTCAGGAGCCCTAGGGTTCAGTACCTGGCTTTGGTTTTGCTTGAAGCCATTGTTAAGAATTGTGAGAGAGCCTTCTCAGAAGTGGCAGGTGAGAAAGTCCTCGATGAGATGGTCGCAATGGTTAATGATCCTCAGACTGTTGTGAATAACCGAAACAAGGCGCTAATGCTGATTGAGGCGTGGGGAGAGTCAACCAGTGAGCTTCGCTATTTGCCTGTATACGAAGAAACATACAAGAGATTGAAATCAAGGGGTGTTCGGTTCCCCGGTCGTGACAATGAAAGCTTGGCACCTATTTTTACTCCTCAACGTTTGGTGACTGCTCCAGAAGCAGATGCTGGTCGTTCAGGACAGTTTCAGGATGATGTTCCTCTGCAAAGTTTCACACCTGACCAAACAAAGGAGGCTTTTGATGTTGCAAGAAATAGCATTGAGCTTCTTTCTACTGTTTTGTCTTCATCACCCCAACAGGATGTTCTAAAGGATGATCTGACTACAGCGCTAGTACAGCAGTGTCGTCTGTCTCAATTTACAGTCCAGCGAATTGTCGAGACTGCTGGGGATAACGAAGCACTGCTTTTTGAGGCCTTGAATGTTAATGACGAGATTCAGAGGGTTCTCTCCGATTATGAAGAGATGAATAAGCCTAAAGCTGTTCCCGATAAGCATGAACCTGCTATGATACCTGTGGCTGTTGAGCCAGACGAGTCACCTTTTAATGCACAGGAAGATGCCTTGATTAGAAAGCCAGCTAGTTCAAGAGCCGGAGTTGATGGAGGGAATAATGATGAGATGATGGATGATCTTGATGAGATGATATTTGGGAAAAAAGATGGGGATGCATCGTCAAGGGGAGGCCAAGATCCAAAGAAGCAGGAGTCACCAGAAGATGATCTCATCTCCTTCTAA 1191 0.4559 MSDDLMEKVSALGERLKIGGSEVGRKMSAGMSSVSFKMKEFFLGASQADKLVEDATSDGLDEPDWAMNLELCDMINNERVNSVEVICAIKRRIAFRSPRVQYLALVLLEAIVKNCERAFSEVAGEKVLDEMVAMVNDPQTVVNNRNKALMLIEAWGESTSELRYLPVYEETYKRLKSRGVRFPGRDNESLAPIFTPQRLVTAPEADAGRSGQFQDDVPLQSFTPDQTKEAFDVARNSIELLSTVLSSSPQQDVLKDDLTTALVQQCRLSQFTVQRIVETAGDNEALLFEALNVNDEIQRVLSDYEEMNKPKAVPDKHEPAMIPVAVEPDESPFNAQEDALIRKPASSRAGVDGGNNDEMMDDLDEMIFGKKDGDASSRGGQDPKKQESPEDDLISF 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g2027 396 ProSiteProfiles VHS domain profile. 55 183 IPR002014 GO:0035091|GO:0043130
Bisa02g2027 396 SUPERFAMILY ENTH/VHS domain 42 183 IPR008942 -
Bisa02g2027 396 Gene3D - 221 310 IPR038425 -
Bisa02g2027 396 MobiDBLite consensus disorder prediction 363 396 - -
Bisa02g2027 396 Pfam VHS domain 46 179 IPR002014 GO:0035091|GO:0043130
Bisa02g2027 396 FunFam TOM1-like protein 2 41 200 - -
Bisa02g2027 396 PANTHER TOM1-LIKE PROTEIN 1 1 396 IPR044836 GO:0035091|GO:0043130|GO:0043328
Bisa02g2027 396 CDD VHS 48 177 - -
Bisa02g2027 396 SUPERFAMILY GAT-like domain 181 310 - -
Bisa02g2027 396 CDD GAT_GGA-like_plant 231 307 - -
Bisa02g2027 396 ProSiteProfiles GAT domain profile. 222 309 IPR004152 GO:0035091|GO:0043130
Bisa02g2027 396 Pfam GAT domain 235 307 IPR004152 GO:0035091|GO:0043130
Bisa02g2027 396 Gene3D - 43 198 IPR008942 -
Bisa02g2027 396 SMART VHS_2 48 179 IPR002014 GO:0035091|GO:0043130
Bisa02g2027 396 MobiDBLite consensus disorder prediction 335 396 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g2027 Bisa-ChrBisa02 44685509 44694141 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa02g2027 02 44685509 44694141 Bisa02g2027 02 44685509 44694141 ECH