Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g1334 ATGGCCACGACGAATTCGAGGTTCATCAAATGCGTCACTGTTGGAGACGGAGCCGTAGGGAAGACCTGCATGCTTATTTGCTACACCAGCAACAAATTCCCCACTGACTATATCCCTACGGTGTTTGATAATTTCAGTGCAAATGTGGTCGTTGAGGGCACAACTGTCAATTTAGGCCTCTGGGACACTGCTGGGCAAGAGGATTACAACAGACTGAGGCCTTTGAGCTATAGAGGGGCAGATGTTTTTGTCTTAGCTTTCTCTCTAGTTAGTCGCGCAAGTTACGAGAATGTACTGAAGAAGTGGATCCCGGAACTCCAGCATTTCGCCCCCGGCATCCCAGTGGTATTAGTAGGCACCAAATTGGATCTCCGAGAAGACAAGCACTATATGGTTGATCATCCTGGTCTGGTGCCTGTGACTACTGAGCAGGGCGAGGAACTTCGTAAACAGATTGGGGCGACCTATTATATTGAGTGCAGCTCAAAAACTCAGCAGAATGTCAAGGCTGTCTTTGATGCCGCGATCAAGATGGTCATCAAGCCTCCACAGAAACAGTCCGAGAAGAAGAAGAAACCACGTCGAGGATGTCTACTGTTAGTACACTCTACCCACAAAATAGTTTTCAGCATTAAACGTCATGTGTGGAAGGAATCTCGTTCGTCAAAAATGAAACATAAGAAATTCGTCCAGGGGCTTTTATTTATTAGAATAGACATAAGAAACTACAATATCACTTATTTCTATATCATTTAA 756 0.4484 MATTNSRFIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVVVEGTTVNLGLWDTAGQEDYNRLRPLSYRGADVFVLAFSLVSRASYENVLKKWIPELQHFAPGIPVVLVGTKLDLREDKHYMVDHPGLVPVTTEQGEELRKQIGATYYIECSSKTQQNVKAVFDAAIKMVIKPPQKQSEKKKKPRRGCLLLVHSTHKIVFSIKRHVWKESRSSKMKHKKFVQGLLFIRIDIRNYNITYFYII 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g1334 251 PRINTS Transforming protein P21 ras signature 157 179 - -
Bisa02g1334 251 PRINTS Transforming protein P21 ras signature 49 71 - -
Bisa02g1334 251 PRINTS Transforming protein P21 ras signature 111 124 - -
Bisa02g1334 251 PRINTS Transforming protein P21 ras signature 32 48 - -
Bisa02g1334 251 PRINTS Transforming protein P21 ras signature 9 30 - -
Bisa02g1334 251 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 8 179 IPR027417 -
Bisa02g1334 251 PANTHER RHO FAMILY GTPASE 6 198 IPR003578 GO:0005525|GO:0007264
Bisa02g1334 251 ProSiteProfiles small GTPase Rho family profile. 2 179 - -
Bisa02g1334 251 Gene3D - 2 200 IPR027417 -
Bisa02g1334 251 NCBIfam small GTP-binding protein domain 9 173 IPR005225 GO:0005525
Bisa02g1334 251 FunFam Rac-like GTP-binding protein 3 2 200 - -
Bisa02g1334 251 CDD Rop_like 8 180 - -
Bisa02g1334 251 SMART rab_sub_5 9 182 - -
Bisa02g1334 251 SMART ras_sub_4 6 182 - -
Bisa02g1334 251 Pfam Ras family 10 179 IPR001806 GO:0003924|GO:0005525
Bisa02g1334 251 SMART rho_sub_3 11 182 IPR001806 GO:0003924|GO:0005525
Bisa02g1334 251 ProSiteProfiles small GTPase Ras family profile. 4 246 IPR001806 GO:0003924|GO:0005525
Bisa02g1334 251 ProSiteProfiles small GTPase Rab1 family profile. 4 231 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g1334 Bisa-ChrBisa02 22774057 22778575 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g1334 9 194 EF-hand Containing Proteins AT5G27540 24.868 3.41e-14 70.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa02g1334 02 22774057 22778575 Bisa02g1334 02 22774057 22778575 ECH