Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g1288 ATGCATTCCTTGAGTTCTAAGGCTCTAGTGGATCTGTGGTTACCGGGTCGGGTGGGATCCGGATCCGCAGATGCCGAGACGGGTTCGAAGAGGCAGTGGGTGAAATGCATAAACCTAAGGAGAACCCGTGGGATCGTTGCATGTGTTCCAGAGAGGAATGAGAATGGCTGGGGAGAGAGTCGGAGTACGAGTCAGAGTTCGAGTTCCAGCTCGTCTGTGTCCCGAAGCCACACCTACGCCCTCTTGAAGCAGCAAATGGAGCTAGCTGCGAGATCCGAGGACTATGAAGAAGCTGCAAGGATTCGTGATTCGATTAAATCGTTCGAAGACGAGGAGCCAATCTTGCGTCTGCGGAGATTAATGAAAGGAGCAATTGCTGATGAGAGGTTTAAGGATGCAGCTAAATATCGTGATGAGCTAAGAGAAATTGGTCCACACTCTCTCTTAAAATGTTCCAGTAATACTACGACCTTGGGAATGAGGGTTCAAGTCAGGAGTGTATATATAGAGGGCAGAAGTCAGCCTTTAAAGGGGCTTTACTTTTTTGCATACAGAGTCAGAATTACGAACAACTCTAACCGCCCTGTTCAACTCCTTAGAAGGCATTGGATTATAACTGATGCAAATGGGAAAACAGAAAATGTCTGGGGGATCGGGGTAGTTGGTGAACAGCCAGTTATGCTTCCTAAGACTAGCTTTGAATACTCTTCAGCATGTCCAATTAGCACACCAAATGGTAGAATGGAAGGGGACTTTGAGATGATACATGTTGATAAAGTAGGAGCACGAACGTTTAACGTGGCTATTGCTCCCTTTTCTCTCGCTCTGCTTGGAGATGATGATGGTCATACGATTTGA 858 0.4674 MHSLSSKALVDLWLPGRVGSGSADAETGSKRQWVKCINLRRTRGIVACVPERNENGWGESRSTSQSSSSSSSVSRSHTYALLKQQMELAARSEDYEEAARIRDSIKSFEDEEPILRLRRLMKGAIADERFKDAAKYRDELREIGPHSLLKCSSNTTTLGMRVQVRSVYIEGRSQPLKGLYFFAYRVRITNNSNRPVQLLRRHWIITDANGKTENVWGIGVVGEQPVMLPKTSFEYSSACPISTPNGRMEGDFEMIHVDKVGARTFNVAIAPFSLALLGDDDGHTI 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g1288 285 Gene3D ApaG domain 150 283 IPR036767 -
Bisa02g1288 285 Gene3D UVR domain 76 112 - -
Bisa02g1288 285 PANTHER OS05G0170800 PROTEIN 40 281 - -
Bisa02g1288 285 ProSiteProfiles UVR domain profile. 76 111 IPR001943 GO:0005515
Bisa02g1288 285 Pfam ApaG domain 172 255 IPR007474 -
Bisa02g1288 285 SUPERFAMILY ApaG-like 156 275 IPR036767 -
Bisa02g1288 285 ProSiteProfiles UVR domain profile. 111 146 IPR001943 GO:0005515
Bisa02g1288 285 Pfam UvrB/uvrC motif 112 143 IPR001943 GO:0005515
Bisa02g1288 285 Pfam UvrB/uvrC motif 82 110 IPR001943 GO:0005515
Bisa02g1288 285 SUPERFAMILY C-terminal UvrC-binding domain of UvrB 78 109 IPR036876 -
Bisa02g1288 285 ProSiteProfiles ApaG domain profile. 154 281 IPR007474 -
Bisa02g1288 285 MobiDBLite consensus disorder prediction 53 75 - -
Bisa02g1288 285 MobiDBLite consensus disorder prediction 56 75 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g1288 Bisa-ChrBisa02 21853453 21856191 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa08g1986 08 47710691 47713951 Bisa02g1288 02 21853453 21856191 CCT
Bisa02g1288 02 21853453 21856191 Bisa02g1288 02 21853453 21856191 ECH