Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g1279 ATGTTGGTAAAAACTTCCGCGATGGGTAGCATTTGGATATGCCATCTGTTTCTGTTTCTGGCCATACTGAATGCTTCTTTTGTCACAACTCTTGGGGATAATACATCAGATTCCTACTGGCTTCTTAGAATGAAATCTCAACTGGTTGATCCATTTGGAGCTCTAAAAAACTGGTCTCCTATGGTTCCTATGTGTAGCTTTAATGGAGTAACATGTTCACTTGATCAGACTCACATCACAGGCCTGAACTTATCTGGTTCAGGAATATCAGGTTCCATCTCACTAGACCTCATCAGCCACCTCACTTCTCTTGAAACACTTGATTTGTCCTCAAACTCCCTCAGTGGCTCCATTCCTTCTGAGATTGGAGAGCTTCAAAATCTAAAAACACTCCTACTATTCTCAAATTACCTCTTTGGCACCATTCCTGGAGAGATAGGTAATTTGAAGAAGTTGCAGGTTCTTAGAATTGGAATTAACTTGTTCACTGGTGAAATCACACCCACTATTGGTAACTTGAAAAAGCTGAAAGTGTTGGGTATGGCTTACTGCAATTTTAATGGAAGCATACCCATTGAGATTGGAAGCTTGAAGAATATGGAGTCTCTTGATTTACAGATGAACAGTCTTGGAGGACTCATACCCAAAGAGATTCAAGGCTGTGAAAAGCTGCAGAATTTTGCAGCATCAAATAACTTTCTTGAAGGAGACATACCTTCTTCTTTGGGGTCCCTTGAATCGCTGCAAATTCTGAACTTGGCCAACAATTCCCTGTCTGGGTCAATTCCTTCTTCCTTGAGTCACCTCTCCAAGTTGAAGTATCTAAATTTGCTGGGAAACAAACTAAGTGGAGAAGTTCCTTCAGAGCTAAACAATTTGAGTCAGCTTCAGATGCTAGACTTGTCAAGAAACAACCTTTCTGGACTAATAAATCTTCTCAATGTCCAATTACAGAATCTCCAAACTCTGGTTCTGTCTGATAACTCTTTGACCGGTAACATTCCAGCCAGCTTCTGCTTCAGAAGTTCAAAACTTGAGCAACTTTTCTTGGCTAGGAACAAGCTTTCTGGTAAGTTTCCCTTGGAGTTACTCAACTGCTCCTCAATTCAACAGTTGGACCTCTCTGATAACAGCTTTGAAGGAGAGCTTCCACCAACCTTGGACAAACTACAGAACCTCACAGATCTTTTACTCAACAACAACAGCTTCATCGGATCGGTACCCTCAGAAATTGGAAACATTAGTACATTGAAAGGTCTCTTCTTGTTTCATAATGTGTTTACAGGAAAAATCCCAGTGGAGATTGGAAGGCTTCAGAGGTTGGAAACCATATACCTCTACGATAACCAGATGTCTGGTCCAATACCAAGAGAGCTAACAAACTGCACAAGGTTAAAAGAAATTGACTTCTTTGGAAACCATTTTTCTGGGACCATTCCTGAGACTATAGGTAAGCTTAAGGACTTGGTTTTACTTCAGTTAAGGCAAAACGACTTGTGGGGTCCTATCCCTCCAAGTATGGGGTACTGTAAGAGCCTTCAGTTACTGGCACTAGCAGATAATAAGCTATCTGGTTCTATACCACCCACATTTCGTTACCTTTCAGAACTTAGAACCGTTACTCTTTACAATAACTCCTTTCAAGGACCACTTCCAGAGTCACTCTCTCTTCTAAAAAACCTCAGAATCATAAATTTTTCACAAAACAAGTTCAATGGAACCATCCTTCCTCTCACTGGTTCAAATTCTCTGACTGCTTTGGACTTGACTAACAACAGCTTCTCTGGTCCGATCCCCTCGAGCCTTGCCATGTCGAGAAATCTCAGCCGTCTAAGACTTGCATATAATAACCTCACAGGAAGCATTCCTTCTGAAATTGGTCATCTCAGTGAACTCAACTTTCTTGATCTGTCATTTAACAATTTAACAGGAGAGGTGCCACTTCGACTCTCAAACTGTAGAAAAGTTGAACACTTTCTGTTGAATAACAACAGATTGAGTGGTGAAATGCCTTCTTGGTTGGGAAGCTTGCAGGAACTTGGTGAGCTGGATCTCTCATTCAATGACTTCCATGGAAGAGTACTTTCTGAGCTTGGGAGCTGTTCAAAACTGCTCAAGCTTTCTCTCCATCACAACAATCTCTCAGGTGAAATCCCACCAGAGATAGGAAATCTCACTTCCCTCAATGTCCTTAACCTCCAAAGCAATCATTTCTCTGGCAACATCCCTTCATCAATTCAGCAGTGCAAGAAGCTCTATGAGCTTAGGCTCTCAGAAAACCTCTTCACAGGCGATATACCAGATTCACTAGGAGGGCTCACAGAACTCCAAGTCATATTAGACCTAAGCAGAAACCTCTTATCTGGGGTAATCCCCATTTCTATGGGAAACCTCATGAAGCTAGAAAGACTAAATCTTTCCTTCAACAATCTTCATGGACAAGTCCCTTCTTCACTGGGTAAACTCACAAGCCTGCACGTGCTCAATATCTCAAACAACCACCTTCAAGGCATGATTCCTTCAACATTCTCAGGATTCCCACAAAGCTCCTTCATGAAGAATGACCATTTGTGTGGCCTACCTTTAGCATTGTGCTCAGAATCCAACGGGCGGGATCAAGTGGAGCTGTCCAACAAAGCAGTGGCAGCAATTATCGTCGCTATTGTCTTTACTTCAACGGTAATATGCATAGTGTTGCTGTATATTATGGCGAGAATTTGGTGTAATTGGAGAAAAGTTGCGATTTTAAGTGAAGATGGAGGCACGGGAGAGGGAAAGAGAGAGGAGGGAAGATGGTTTTGTAGTGACAAGAAGACGAGAAATGGAGGGTATTGGAATATGAATTTTGGGTTTATTCCTTCGCCGGAAAAGCAGAGTTCAGAGGCAACGACTTGCGTTTTCAAGCTTAAAATGGATGCAGAGGCCATGGAAAATTCCTTGGTTTGA 2946 0.4192 MLVKTSAMGSIWICHLFLFLAILNASFVTTLGDNTSDSYWLLRMKSQLVDPFGALKNWSPMVPMCSFNGVTCSLDQTHITGLNLSGSGISGSISLDLISHLTSLETLDLSSNSLSGSIPSEIGELQNLKTLLLFSNYLFGTIPGEIGNLKKLQVLRIGINLFTGEITPTIGNLKKLKVLGMAYCNFNGSIPIEIGSLKNMESLDLQMNSLGGLIPKEIQGCEKLQNFAASNNFLEGDIPSSLGSLESLQILNLANNSLSGSIPSSLSHLSKLKYLNLLGNKLSGEVPSELNNLSQLQMLDLSRNNLSGLINLLNVQLQNLQTLVLSDNSLTGNIPASFCFRSSKLEQLFLARNKLSGKFPLELLNCSSIQQLDLSDNSFEGELPPTLDKLQNLTDLLLNNNSFIGSVPSEIGNISTLKGLFLFHNVFTGKIPVEIGRLQRLETIYLYDNQMSGPIPRELTNCTRLKEIDFFGNHFSGTIPETIGKLKDLVLLQLRQNDLWGPIPPSMGYCKSLQLLALADNKLSGSIPPTFRYLSELRTVTLYNNSFQGPLPESLSLLKNLRIINFSQNKFNGTILPLTGSNSLTALDLTNNSFSGPIPSSLAMSRNLSRLRLAYNNLTGSIPSEIGHLSELNFLDLSFNNLTGEVPLRLSNCRKVEHFLLNNNRLSGEMPSWLGSLQELGELDLSFNDFHGRVLSELGSCSKLLKLSLHHNNLSGEIPPEIGNLTSLNVLNLQSNHFSGNIPSSIQQCKKLYELRLSENLFTGDIPDSLGGLTELQVILDLSRNLLSGVIPISMGNLMKLERLNLSFNNLHGQVPSSLGKLTSLHVLNISNNHLQGMIPSTFSGFPQSSFMKNDHLCGLPLALCSESNGRDQVELSNKAVAAIIVAIVFTSTVICIVLLYIMARIWCNWRKVAILSEDGGTGEGKREEGRWFCSDKKTRNGGYWNMNFGFIPSPEKQSSEATTCVFKLKMDAEAMENSLV 981
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g1279 981 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 480 576 - -
Bisa02g1279 981 SMART LRR_sd22_2 101 127 - -
Bisa02g1279 981 SMART LRR_sd22_2 342 374 - -
Bisa02g1279 981 SMART LRR_sd22_2 197 223 - -
Bisa02g1279 981 SMART LRR_sd22_2 269 292 - -
Bisa02g1279 981 SMART LRR_sd22_2 293 314 - -
Bisa02g1279 981 SMART LRR_sd22_2 438 470 - -
Bisa02g1279 981 FunFam Uncharacterized protein 192 286 - -
Bisa02g1279 981 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 577 869 - -
Bisa02g1279 981 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 287 383 - -
Bisa02g1279 981 Pfam Leucine rich repeat N-terminal domain 36 73 IPR013210 -
Bisa02g1279 981 SUPERFAMILY L domain-like 340 666 - -
Bisa02g1279 981 FunFam Uncharacterized protein 384 479 - -
Bisa02g1279 981 Gene3D Ribonuclease Inhibitor 34 193 IPR032675 -
Bisa02g1279 981 Pfam Leucine Rich Repeat 103 123 IPR001611 GO:0005515
Bisa02g1279 981 Pfam Leucine Rich Repeat 824 846 IPR001611 GO:0005515
Bisa02g1279 981 SUPERFAMILY RNI-like 587 845 - -
Bisa02g1279 981 ProSiteProfiles Leucine-rich repeat profile. 247 270 IPR001611 GO:0005515
Bisa02g1279 981 ProSiteProfiles Leucine-rich repeat profile. 295 316 IPR001611 GO:0005515
Bisa02g1279 981 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 34 191 - -
Bisa02g1279 981 Gene3D Ribonuclease Inhibitor 316 531 IPR032675 -
Bisa02g1279 981 ProSiteProfiles Leucine-rich repeat profile. 103 125 IPR001611 GO:0005515
Bisa02g1279 981 Gene3D Ribonuclease Inhibitor 194 315 IPR032675 -
Bisa02g1279 981 Gene3D Ribonuclease Inhibitor 532 873 IPR032675 -
Bisa02g1279 981 PRINTS Leucine-rich repeat signature 293 306 - -
Bisa02g1279 981 PRINTS Leucine-rich repeat signature 104 117 - -
Bisa02g1279 981 Pfam Leucine rich repeat 230 282 IPR001611 GO:0005515
Bisa02g1279 981 Pfam Leucine rich repeat 751 811 IPR001611 GO:0005515
Bisa02g1279 981 Pfam Leucine rich repeat 319 378 IPR001611 GO:0005515
Bisa02g1279 981 SMART LRR_typ_2 317 342 IPR003591 -
Bisa02g1279 981 SMART LRR_typ_2 245 269 IPR003591 -
Bisa02g1279 981 SMART LRR_typ_2 197 220 IPR003591 -
Bisa02g1279 981 SMART LRR_typ_2 390 414 IPR003591 -
Bisa02g1279 981 SMART LRR_typ_2 438 462 IPR003591 -
Bisa02g1279 981 SMART LRR_typ_2 725 749 IPR003591 -
Bisa02g1279 981 SMART LRR_typ_2 822 845 IPR003591 -
Bisa02g1279 981 SMART LRR_typ_2 798 821 IPR003591 -
Bisa02g1279 981 SMART LRR_typ_2 293 315 IPR003591 -
Bisa02g1279 981 SMART LRR_typ_2 677 701 IPR003591 -
Bisa02g1279 981 SMART LRR_typ_2 101 125 IPR003591 -
Bisa02g1279 981 SMART LRR_typ_2 558 583 IPR003591 -
Bisa02g1279 981 SMART LRR_typ_2 629 653 IPR003591 -
Bisa02g1279 981 SUPERFAMILY L domain-like 36 311 - -
Bisa02g1279 981 PANTHER POLYGALACTURONASE INHIBITOR 1 316 436 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g1279 Bisa-ChrBisa02 21687887 21690832 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g1279 50 866 Receptor kinase-like Gene Family AT5G46330 33.939 4.74e-119 390
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa02g1279 02 21687887 21690832 Bisa02g1279 02 21687887 21690832 ECH