Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g1261 ATGGGGAAGTTTCAGACTCTGTTCTCCGTGAGGCACTTGCTGGTGTTATCTCTTGCTCTGAATACGAGTCTTATACTGAAAGTGGTGTATGAAGGCGAAGAAGGTTCGTGTTTGAACAGAAAGGGACGTGTTATCCACAAGTCACGTTTGGCTGTATCCTCCTCTTCTCCTTCTTCGTCCCCAGCTTACTCTACTCCCACAAATCATCCACAAGCCAAGGACAGAGTCATCAATCTCGACCATGGGGATCCGACGATGTACGAGAGGTACTGGAGAGAGAAGGGAAAGAGGACGACGATTATCATTCCGGGGTGGCAATCTTTGAGCTATATATCGGACTGGAACAACGTGTGCTGGTTTCTGGAGGCAGAGTTGGCGAGGGAGGTGGTGAGGCTGCACAGAGTGGTGGGAAACGCCGTCACGGAAGGGAGGCACATCGTCGTAGGGACGGGCTCGTCTCAGCTGTTTCTGGCGGCTCTGTATGCTCTGTCTCCGCCTGACGCATCTGAACCCACCAGTGTGGTCTCTGCCACGCCTTATTACTCGTCGTACCCGATGATGACTGACTACCAGAAATCGGGGCTGCATAAATGGGGTGGAGATGCAGAGAGGTACGAGAAGGAGGGTCCGTACATAGAGGTGGTGACTTCTCCGAACAACCCGGACGGGAATGTCAGGCGGTCCGTGGTGAACCGGACCGGGGGGATGTTGGTTCATGATCTTGCGTATTATTGGCCACAATACACTCCGATTTCGTCGCCGGCGGATCATGACTTGATCCTCTTCACTGTGTCCAAGAGCACTGGCCATGCCGGAATACGCATAGGGTGGGCTCTTGTGAAAGACAAAGAGGTAGCGAAGAAGATGACCAAGTTCATAGAGCTCAATACCATAGGCGTGTCAAGGGATTCTCAGCTCAGAGCTGCCAAGGTTCTAAGGATCGTTTCTGATAGCTGCGAAGAGGAAGAAGAAGGTGAATCATTCTTCGAGTTCAACTACAAGGTGATGGCCCACCGCTGGAACCTACTCAGATCAGTCCTCGCACGTACTGATCCCATCCTCACCTTGCCCAACTTCCCTCCTTCCTTCTGCAACTTTTTCCAACAACAGTCCCAACCTCAACCTGCATTTGCGTGGTTGAAGTGCGAGGCAGAAATACAGGACTGTGAGGTTTTCCTTCGGCGACACAAGATCTTAGCTCGTAGCGGGAAGCACTTCGGGGTTAGCCCAAGGTACGTGAGAGTTAGCATGCTGGACACACATGAAAATTTCATGCTGTTCATAGATAGATTGGCAGCCATACAGTCTCTTGAATGTTAA 1320 0.5144 MGKFQTLFSVRHLLVLSLALNTSLILKVVYEGEEGSCLNRKGRVIHKSRLAVSSSSPSSSPAYSTPTNHPQAKDRVINLDHGDPTMYERYWREKGKRTTIIIPGWQSLSYISDWNNVCWFLEAELAREVVRLHRVVGNAVTEGRHIVVGTGSSQLFLAALYALSPPDASEPTSVVSATPYYSSYPMMTDYQKSGLHKWGGDAERYEKEGPYIEVVTSPNNPDGNVRRSVVNRTGGMLVHDLAYYWPQYTPISSPADHDLILFTVSKSTGHAGIRIGWALVKDKEVAKKMTKFIELNTIGVSRDSQLRAAKVLRIVSDSCEEEEEGESFFEFNYKVMAHRWNLLRSVLARTDPILTLPNFPPSFCNFFQQQSQPQPAFAWLKCEAEIQDCEVFLRRHKILARSGKHFGVSPRYVRVSMLDTHENFMLFIDRLAAIQSLEC 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g1261 439 Gene3D - 121 325 IPR015421 GO:0003824
Bisa02g1261 439 MobiDBLite consensus disorder prediction 51 72 - -
Bisa02g1261 439 CDD AAT_like 124 433 - -
Bisa02g1261 439 MobiDBLite consensus disorder prediction 51 74 - -
Bisa02g1261 439 Pfam Allinase 77 434 IPR006948 GO:0016846
Bisa02g1261 439 PANTHER BIFUNCTIONAL ASPARTATE AMINOTRANSFERASE AND GLUTAMATE/ASPARTATE-PREPHENATE AMINOTRANSFERASE-RELATED 68 433 - -
Bisa02g1261 439 Gene3D Aspartate Aminotransferase, domain 1 326 435 IPR015422 GO:0003824
Bisa02g1261 439 Gene3D - 33 117 IPR037029 GO:0016846
Bisa02g1261 439 SUPERFAMILY PLP-dependent transferases 69 433 IPR015424 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g1261 Bisa-ChrBisa02 21068771 21072049 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa08g2012 08 48420777 48427957 Bisa02g1261 02 21068771 21072049 CCT
Bisa02g1261 02 21068771 21072049 Bisa02g1261 02 21068771 21072049 ECH