Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g1255 ATGGGGCTTGCTGGAGATAGGTCCTTAGAGCCAGCGTCAGATATGAAAGTGAGCGTAACAGAGATGGAGAGGAAACGACTTGGAAGGTTGTTGAGAATCGGGGAGTACCACCGAAAAGAGGACTTCATCGCTGTCGAGGGATCCAGTGTTGGAGCGGTGGCAGCTGTATTACTGAGAGAAGAAAGGGACAAGGAGGAAGGAATGGAGGATGAGGCCGACGTCGATGTTGAGGGTTTGGTAGACGCTAAAGGCCACTCTGTCAAATTCTGTAAACGCTTGAGCGAAGAGAGAAAGCGAAAGAGCGAAGAGAGAGAAAGACAGTGCGAGAAGGGTTTGGGTATTGGATCTAGCAGAAGCAGAAGCAGTGTGGCAATCTCGGGTATGGGGGAGAGTATACTGGGCGGTGCTTCTCTACCTTCGGGTCCAGACGCAAAGAAGAGGAGGGTCACCTATTTCTATGAACCCACCATCGGCGATTACTACTACGGCCAAGGCCATCCTATGAAACCCCATCGGATTCGCATGGCCCACAATCTTATCGTCCATTACTCCCTTCATCGCCGCATGGAAATCAACCGTCCCTTCCCCGCCGCGCCTGACGACATCCGCCGATTCCACACCGACGAATACGTCGACTTCCTCTCCACCGTCTCGCCGGAGACTCTCGGTGAGAACACATTCGCCCGTCAGCTCAAGCGCTTCAATGTTGGTGAGGACTGTCCTGTCTTTGACGGCTTATTCAATTTTTGTCAGGCCTCTGCCGGTGGCTCCATTGGTGCCGCGGTCAAGTTGAACCGTGGGGATGCTGATATTGCCATCAATTGGGCTGGTGGCTTGCACCATGCTAAGAAGTCTGAGGCCTCTGGGTTTTGTTACGTCAATGACATTGTCCTCGGCATTCTTGAGCTTCTCAAGGTTCACAGGCGTGTGCTGTATGTTGACATTGACGTCCACCATGGAGATGGTGTTGAGGAGGCTTTCTACACAACTGATAGAGTGATGACAGTTTCATTTCATAAGTTTGGGGATTTTTTCCCGGGCACTGGGCACATTAAAGATGTTGGGGTGGGCCCTGGGAAGAATTATGCTATAAATGTCCCATTGAATGATGGGATGGATGATGAGAACTTCCGTGGTCTGTTTCGCCCCATCATTCAGAAAGTCATGGAGGTTTATCAACCTGATGCAGTTGTTCTTCAGTGTGGTGCTGATTCATTGTCTGGTGACAGGTTGGGTTGCTTCAATTTGTCTGTGAAGGGTCATGCAGATTGCCTTCGTTTCCTTAGATCCTTCAATGTTCCTCTATTGGTCTTGGGTGGGGGAGGATATACAATTCGGAATGTTGCTCGCTGCTGGTGTTATGAGACAGCGGTGGCGGTAGGAGTGGAACCTGATAATAAGTTGCCTTATAATGAATATTTTGAGTATTTTGGCCCAGATTACACTCTTCATGTTGATCCATGCAACATGGAGAACCTAAACTCACCCAAGGATATGGAGAAAATAAGGATCACACTACTAGAGCAACTTTCCAGACTTCCTCATGCACCCAGTGTACCTTTTCAGACAACACCATCCACCATTGATGTTCCAGAAGAGGCAGAAGAGGACATGGATCGAAGGCCAAAACGTCGCATATGGAGTGGTGAGGATTATGATTCTGATCGTGATGAAGATGAGAAGGCTAGTTCAAAGTCCTCAAATTTAACTGCCCACATAAGGGATGTTCCAGATGAGATGGAAGAAGATAAGCCCGAAGTGCATCCTTCATCTTGA 1776 0.4893 MGLAGDRSLEPASDMKVSVTEMERKRLGRLLRIGEYHRKEDFIAVEGSSVGAVAAVLLREERDKEEGMEDEADVDVEGLVDAKGHSVKFCKRLSEERKRKSEERERQCEKGLGIGSSRSRSSVAISGMGESILGGASLPSGPDAKKRRVTYFYEPTIGDYYYGQGHPMKPHRIRMAHNLIVHYSLHRRMEINRPFPAAPDDIRRFHTDEYVDFLSTVSPETLGENTFARQLKRFNVGEDCPVFDGLFNFCQASAGGSIGAAVKLNRGDADIAINWAGGLHHAKKSEASGFCYVNDIVLGILELLKVHRRVLYVDIDVHHGDGVEEAFYTTDRVMTVSFHKFGDFFPGTGHIKDVGVGPGKNYAINVPLNDGMDDENFRGLFRPIIQKVMEVYQPDAVVLQCGADSLSGDRLGCFNLSVKGHADCLRFLRSFNVPLLVLGGGGYTIRNVARCWCYETAVAVGVEPDNKLPYNEYFEYFGPDYTLHVDPCNMENLNSPKDMEKIRITLLEQLSRLPHAPSVPFQTTPSTIDVPEEAEEDMDRRPKRRIWSGEDYDSDRDEDEKASSKSSNLTAHIRDVPDEMEEDKPEVHPSS 591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g1255 591 Pfam Histone deacetylase domain 166 457 IPR023801 -
Bisa02g1255 591 MobiDBLite consensus disorder prediction 572 591 - -
Bisa02g1255 591 PANTHER HISTONE DEACETYLASE 2-RELATED 136 470 - -
Bisa02g1255 591 PRINTS Histone deacetylase superfamily signature 277 300 IPR000286 -
Bisa02g1255 591 PRINTS Histone deacetylase superfamily signature 309 324 IPR000286 -
Bisa02g1255 591 PRINTS Histone deacetylase superfamily signature 394 404 IPR000286 -
Bisa02g1255 591 MobiDBLite consensus disorder prediction 96 111 - -
Bisa02g1255 591 PRINTS Histone deacetylase signature 168 185 IPR003084 GO:0004407|GO:0016575
Bisa02g1255 591 PRINTS Histone deacetylase signature 296 312 IPR003084 GO:0004407|GO:0016575
Bisa02g1255 591 PRINTS Histone deacetylase signature 355 368 IPR003084 GO:0004407|GO:0016575
Bisa02g1255 591 PRINTS Histone deacetylase signature 234 251 IPR003084 GO:0004407|GO:0016575
Bisa02g1255 591 PRINTS Histone deacetylase signature 255 275 IPR003084 GO:0004407|GO:0016575
Bisa02g1255 591 PRINTS Histone deacetylase signature 201 219 IPR003084 GO:0004407|GO:0016575
Bisa02g1255 591 PRINTS Histone deacetylase signature 372 390 IPR003084 GO:0004407|GO:0016575
Bisa02g1255 591 MobiDBLite consensus disorder prediction 96 120 - -
Bisa02g1255 591 SUPERFAMILY Arginase/deacetylase 147 512 IPR023696 -
Bisa02g1255 591 MobiDBLite consensus disorder prediction 515 591 - -
Bisa02g1255 591 FunFam Histone deacetylase 145 524 - -
Bisa02g1255 591 Gene3D Histone deacetylase domain 145 520 IPR037138 -
Bisa02g1255 591 MobiDBLite consensus disorder prediction 534 565 - -
Bisa02g1255 591 Coils Coil 90 110 - -
Bisa02g1255 591 CDD HDAC_classI 152 459 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g1255 Bisa-ChrBisa02 20992678 21003925 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa02g1255 02 20992678 21003925 Bisa02g1255 02 20992678 21003925 ECH