Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g1216 ATGGGTGGATCGATTTCAAAACGAGGGAGCAGGAGGTGTCTTTCAGCTTCCAGGTCCAGTTCACGCTCGTGGGGTTATCCTCAGCCTCAGTCGCCCTCTGTGCGACCAAACCAAGATCACGTGCCTCCGGAATATGTCAGCCCTCCATCACAAGCCTATGGTGGTGGTCGTGCTCCACAGCCTAGAAAGAGGTTAGAGAGGAAGTATTCAAGAATAGAAGACAATTACTTTAGCTTGGACCAGGTTACCGAGGCTTTAGCAGGTGCTGGTCTTGAGTCTTCCAATTTAATTGTTGGTATTGATTTCACAAAGAGCAATGAGTGGACAGGTGGAAGGTCATTTCAAAGGAGAAGCCTGCATCACATTGGTCATGAACAAAATCCGTACGAACAAGCAATATCAATCATTGGGAAAACATTGTCTTCCTTTGATGAGGATAACTTAATTCCCTGTTTTGGATTTGGCGATGCATCAACACATGACCAAGAAGTTTTTAGTTTCTATCCGGATGAGAGATTTTGTCATGGATTTGAAGAAGTGTTGAGCAGGTACCGGGAATTGGTCCCTGAATTAAAGCTTGCAGGACCAACATCGTTTGCCCCAATCATTGAAATGGCAATCACTATAGTTGAGCAAAGTGGTGGCCAATACCATGTCTTATTGATAATAGCAGATGGACAGGTGACAAGAAGTGTTGATACTGAGGGTGGGCAGTTTAGCACTCAAGAAAAACAAACTGTTGAAGCTATTGTAAAAGCAAGTGAATATCCCCTGTCAATTATATTAGTTGGAGTTGGAGACGGGCCATGGGACATGATGAAAGAATTTGATGATAACATACCAGCCCGAGCATTTGATAATTTCCAGTTTGTGAATTTCACAGAAATAATGTCAAAGAATATGGATCGATCCAGAAAAGAAACAGAATTCGCTCTTTCTGCCTTGATGGAAATACCCTCCCAGTACAAGGCAACGCTGGAACTTAATATATTGGGTGCTCGTAGAGGGAAAGCTATAGATAGGGTTCCTCTTCCCCCGCCTCAATATGGCACCACATCTGTAAACGCCCCAAAACCTTCCCGTTCAAGCAGCTTTCAACCTAGCGCCCCAAAACCTTCCCATTCAAGCAGCTTTCAACCTAGCGCCCCAAAACCTTCCCATTCAAGCAGCTTTCAACCTAGCGCACCATCTCACAGACACGAAGATACTAGCGCAGATTGTTCTGCAAGTTCTGCTTCTGATAATCATGTTTGTCCCATTTGTCTCTCCGATCCCAAAAATATGGCCTTTGGTTGCGGGCATCAGACATGCTGTGAGTGCGGACAATATCTTGAGACATGCCCCATTTGCAGGAGTGCCATTGACACTCGAATAAAACTTTATTAG 1386 0.4452 MGGSISKRGSRRCLSASRSSSRSWGYPQPQSPSVRPNQDHVPPEYVSPPSQAYGGGRAPQPRKRLERKYSRIEDNYFSLDQVTEALAGAGLESSNLIVGIDFTKSNEWTGGRSFQRRSLHHIGHEQNPYEQAISIIGKTLSSFDEDNLIPCFGFGDASTHDQEVFSFYPDERFCHGFEEVLSRYRELVPELKLAGPTSFAPIIEMAITIVEQSGGQYHVLLIIADGQVTRSVDTEGGQFSTQEKQTVEAIVKASEYPLSIILVGVGDGPWDMMKEFDDNIPARAFDNFQFVNFTEIMSKNMDRSRKETEFALSALMEIPSQYKATLELNILGARRGKAIDRVPLPPPQYGTTSVNAPKPSRSSSFQPSAPKPSHSSSFQPSAPKPSHSSSFQPSAPSHRHEDTSADCSASSASDNHVCPICLSDPKNMAFGCGHQTCCECGQYLETCPICRSAIDTRIKLY 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g1216 461 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 394 461 IPR013083 -
Bisa02g1216 461 SMART VWA_4 93 296 IPR002035 -
Bisa02g1216 461 MobiDBLite consensus disorder prediction 1 63 - -
Bisa02g1216 461 Pfam Zinc finger, C3HC4 type (RING finger) 415 456 - -
Bisa02g1216 461 MobiDBLite consensus disorder prediction 10 37 - -
Bisa02g1216 461 MobiDBLite consensus disorder prediction 339 413 - -
Bisa02g1216 461 ProSiteProfiles Zinc finger RING-type profile. 418 451 IPR001841 -
Bisa02g1216 461 Pfam Copine 118 331 IPR010734 -
Bisa02g1216 461 PANTHER COPINE FAMILY PROTEIN 1 35 438 - -
Bisa02g1216 461 MobiDBLite consensus disorder prediction 348 398 - -
Bisa02g1216 461 SUPERFAMILY vWA-like 95 277 IPR036465 -
Bisa02g1216 461 SUPERFAMILY RING/U-box 413 457 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g1216 Bisa-ChrBisa02 20353548 20356683 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa02g1216 02 20353548 20356683 Bisa02g1216 02 20353548 20356683 ECH