Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g1192 ATGACCGAACCGCTAGAACCTCAAAGTAATGATTTGCCTCCAAAACCAGAGTTGGGAGCAGCTGAGAGCTCGAAAGTTCTTCAGCCTGCGAAGCTCGTCGTTTTGGCTGACCTTAACGTCGATCCTCCTGAGGCAGACGAAGATGATTCCCCCCATGTGCCTCCCCCAGAAATTACCAGGTTGGCAAATGATGAAAACAGTCAAGAAAAGAGTATGTTGTCCAAAGACACTGATGGCACTGAAGGTGAAGGTAAAAAGTTGAACAAACTGGGGAAGTGCCGTTCCAGACTTAGTAAAACAGATTCTTCTGTTGACTGTGGAGCTGATGCAGATGGTGATCAGCATGTTCAAGGGGTTACTTCCTCTCGGGAGGAAAAAGTTAGCAGCCTGAAGACAGGCTTGGTTCATGTTGCAAGGAAAATGCCCAAAAATGCTCATGCTCATTTTATACTTGGCCTTATGTACCAAAGGTTGGGCCAACCTCAAAAGGCTGTATCAGCATATGAGAAGGCTGCAGAGATCTTAGTCCGGTCTGAGGCTGAGATTAGCCGGCCAGAGTTGCTTTCTTTAGTTCAGATTCACCATGCACAGTGCCTGATACTAGAAAGTTCAGCAGAAAGTAGTTCAGATAAAGAACTTGAACCTCAGGAACTTGAGGAAATTCTTTCTAAACTGAAGGAGTCAGTGCAATCTGATATCAGACAGGCAGCTGTATGGAATACACTAGGATTTATACTTCTTAAAACTGGTCGTGTGCAGAGTGCTATCACAGTATTGTCAACATTGTTGGCTCTAGCACCAGACAACTATGATTGCCTTGGGAATCTTGGGATTTCTTACATTCAAAGTGGGAATTTGGAATTATCTGCAAAATGTTTCCAAGAGTTGATTATAAAAGATCAAAATCATCCTGCAGCTTTGATCAACTATGCTGCCCTTCTTTTATGCAAATATGCTTCAGTTGTAGCAGGTGCTGGTGCAAGTGCTGCTGAAGGTGCTTCTGTAGATCAGGTTGCAGCTGTTAGTGCTGCAAAGGAGTGTCTGCTAGCTGCAATAAACACAGATGCCAAATCAGGACATATCTGGGCAAATCTTGCAAATGCATTTTTTATGTGTGGGGATCATAGAAGTTCCAGCAAGTGCCTGGAGAAGGCTGCAAAACTGGAGCCCAATTGCATGTCTACTCGGTATGCTGTTGCTAACCATAGAATAAAGGATGCTGAAAGATCACAAGATCCTAGTGAACAGCTTTCATGGGCTGGAAATGAGATGGCATCTATAATAAGAGATGGAGATTCATCTTTGGTTGAGCTTCCAGTAGCATGGGCTGGGCTTGCCATGGTTCACAAGGCTCAGCATGAGATAGCAGCAGCTTTTGAAACTGAACAGCATGAGCTGATGGAAGTTGAAGAGCGATCTATTTTCATTTTAAAGCAGGCTATATCCGAAGATCCAGATGATGCTGTGCAATGGCACCAACTTGGTCTTCATAGTCTGTGTACTCGGCAATTCAAAACATCACAGAGGTACCTCAAAGCTGCTCTTGCCCGCGACAAGGAGTGCAGCTTTGCATGGTCAAATCTAGGTGTTTCACTTCATCTATCGGAAGAACCATCAAAAGCTGAAGAAGTATACAAGCAGGCTTTGGCATTGGCGACGACACAACAAGTGCATGCTATATTGTCCAACCTGGGAAATCTCTATCGCCAGCAGAAACAATATCAACGTGCCAAGGCAATGTTTGCGAAGTCACTTGAACTACAGCCTGGCTATGCTCCTGCATATAACAATCTTGGTCTTGTTTTTGTTGCTGAGGGCCTGTGGGAAGAGGCCAAGTATTGTTTTGACAAGGCCCTCCAATCAGATCCCTTACTGGATGCTGCAAAGTCGAACGGGATTAAGGCGGTTACCATGTCAAAGTTATGCAGAGGCCTCTCCTCATGCATTCTTAAAGAATGA 1959 0.4461 MTEPLEPQSNDLPPKPELGAAESSKVLQPAKLVVLADLNVDPPEADEDDSPHVPPPEITRLANDENSQEKSMLSKDTDGTEGEGKKLNKLGKCRSRLSKTDSSVDCGADADGDQHVQGVTSSREEKVSSLKTGLVHVARKMPKNAHAHFILGLMYQRLGQPQKAVSAYEKAAEILVRSEAEISRPELLSLVQIHHAQCLILESSAESSSDKELEPQELEEILSKLKESVQSDIRQAAVWNTLGFILLKTGRVQSAITVLSTLLALAPDNYDCLGNLGISYIQSGNLELSAKCFQELIIKDQNHPAALINYAALLLCKYASVVAGAGASAAEGASVDQVAAVSAAKECLLAAINTDAKSGHIWANLANAFFMCGDHRSSSKCLEKAAKLEPNCMSTRYAVANHRIKDAERSQDPSEQLSWAGNEMASIIRDGDSSLVELPVAWAGLAMVHKAQHEIAAAFETEQHELMEVEERSIFILKQAISEDPDDAVQWHQLGLHSLCTRQFKTSQRYLKAALARDKECSFAWSNLGVSLHLSEEPSKAEEVYKQALALATTQQVHAILSNLGNLYRQQKQYQRAKAMFAKSLELQPGYAPAYNNLGLVFVAEGLWEEAKYCFDKALQSDPLLDAAKSNGIKAVTMSKLCRGLSSCILKE 652
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g1192 652 Pfam Tetratricopeptide repeat 360 392 IPR019734 GO:0005515
Bisa02g1192 652 Pfam Tetratricopeptide repeat 145 174 IPR019734 GO:0005515
Bisa02g1192 652 Pfam Tetratricopeptide repeat 557 620 - -
Bisa02g1192 652 Gene3D Tetratricopeptide repeat domain 331 429 IPR011990 GO:0005515
Bisa02g1192 652 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-CONTAINING PROTEIN-RELATED 28 648 - -
Bisa02g1192 652 MobiDBLite consensus disorder prediction 99 128 - -
Bisa02g1192 652 MobiDBLite consensus disorder prediction 37 87 - -
Bisa02g1192 652 SUPERFAMILY TPR-like 351 623 IPR011990 GO:0005515
Bisa02g1192 652 Pfam Tetratricopeptide repeat 245 302 - -
Bisa02g1192 652 MobiDBLite consensus disorder prediction 69 87 - -
Bisa02g1192 652 ProSiteProfiles TPR repeat profile. 145 178 IPR019734 GO:0005515
Bisa02g1192 652 Pfam Tetratricopeptide repeat 524 555 IPR019734 GO:0005515
Bisa02g1192 652 Gene3D Tetratricopeptide repeat domain 558 634 IPR011990 GO:0005515
Bisa02g1192 652 MobiDBLite consensus disorder prediction 1 24 - -
Bisa02g1192 652 ProSiteProfiles TPR repeat profile. 558 591 IPR019734 GO:0005515
Bisa02g1192 652 SUPERFAMILY TPR-like 139 413 IPR011990 GO:0005515
Bisa02g1192 652 Gene3D Tetratricopeptide repeat domain 474 557 IPR011990 GO:0005515
Bisa02g1192 652 SMART tpr_5 488 521 IPR019734 GO:0005515
Bisa02g1192 652 SMART tpr_5 270 303 IPR019734 GO:0005515
Bisa02g1192 652 SMART tpr_5 236 269 IPR019734 GO:0005515
Bisa02g1192 652 SMART tpr_5 145 178 IPR019734 GO:0005515
Bisa02g1192 652 SMART tpr_5 592 625 IPR019734 GO:0005515
Bisa02g1192 652 SMART tpr_5 558 591 IPR019734 GO:0005515
Bisa02g1192 652 SMART tpr_5 359 392 IPR019734 GO:0005515
Bisa02g1192 652 SMART tpr_5 522 555 IPR019734 GO:0005515
Bisa02g1192 652 Gene3D Tetratricopeptide repeat domain 204 320 IPR011990 GO:0005515
Bisa02g1192 652 ProSiteProfiles TPR repeat region circular profile. 592 623 - -
Bisa02g1192 652 ProSiteProfiles TPR repeat profile. 592 625 IPR019734 GO:0005515
Bisa02g1192 652 Gene3D Tetratricopeptide repeat domain 130 192 IPR011990 GO:0005515
Bisa02g1192 652 ProSiteProfiles TPR repeat profile. 236 269 IPR019734 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g1192 438 624 Glycosyltransferase AT3G04240 26.203 9.69e-12 66.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa02g1192 02 20047838 20054373 Bisa02g1192 02 20047838 20054373 ECH