Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g0134 ATGGCCACCGCCGAAGCAACCGAGAACGGCACCACCACCGCGTCGGAACCCCAGCCACAAGCAGTCACGTTGGAAAATGCCTCCGCCGTCGAACTAGCCACCACCATCCACAACAACGTAGAGGCAACTGATGCGAACGCCACGCAGGCCGACCAACCAACTCAGGAGCCCGAGTCTGAGCCAGCTCAGGTTTCTGAAGCTTCCGCTGATCAGGTGGCCACTACCAACGCCGGCACCGCCAATACCACTCCGCCCGAGAAGAGGTGGCCCGGTTGGCCCGGGGATTGCGTGTTTCGGCTCATTGTGCCGGTCCTTAAGGTAGGTAGTATTATCGGCCGGAAGGGCGAGCTCATTAAGAAGATGTGCGAGGAGACTCGAGCGCGCATTCGTGTCCTCGACGGTGCCGTGGGCACTCCTGATCGAATTGTACTCATATCAGGGAAGGAAGAGCCAGAGGCTTCTCTTTCCCCTGCAATGGACGCTGTGATAAGGGTATTTAAGCGCGTCTATGGATTATCTGAAAGTGATAGTGAGAATAAAGCATCAGGACCTGCTGGGGTTGCTTTTGTTTCTGTTCGTCTATTGGTGGCATCGACGCAGGCTATCAATTTGATAGGAAAGCAAGGTTCATTAATTAAATCTATTCAGGAAAATACCGGTGCTTCTGCTCGCGTATTGTCAGGAGATGAGGTGCCGTTTTATGCTGCTGCGGATGAGAGGATTGTAGAACTGCAGGGAGAAGCTTTGAAGGTCCTTAGGGCTCTCGAAGCAGTAGTTGGCCACCTGAGGAAGTTCTTGGTTGATCATAGTGTTCTTCCCCTTTTTGAGAAAAAAACTTACAATGCAACAGTCCCACAAGACCGCCAAGCAGATGCCTGGGCTGACAAGTCTTCTCTGCATACTGGTTCACAAACTAGCATTAATGCTGATATTCCTCTTTCAACCAAAAGGGATTCTCTCTTTGCTGACCGCGAAAACCAGTTGGATTCACAGCTCCCCTCCTCTGCAATGTCGCTCTATGGGCAGGATTCTTCACTTTCTGGTGTTCGTTCTTCAGCACTTAGTCGTACTGGTGGTCCCATTGTTACTACGGTTATACAAACAATGCAAATACCACTATCCTATGCTGAGGACATCATTGGGATTCAAGGGACTAATATTGCTTACATTCGCCGTACTAGTGGAGCCATATTGACTGTGCAGGAGAGCAGGGTGCCTGATGAAATTATTGTGGAAATTAAAGGCACCTCATCACAGGTTCAATTGGCACAGCAGTTGATTCAGGAAGTTATAAGCAATCACAAAGAACCAGTCTTAAACAGTTACAGCAGGTTAGATGCAGGTCTGAGGTCTTCATACTCTCAGTTGGGGGCCAGTACATCATACTCCTCATCTTCAATAGCCTCACAACCCTACACAGGGTATGGTTCTTCTGGATTAGGAGGCTATAGTACTTTTAGACTTTGA 1467 0.4949 MATAEATENGTTTASEPQPQAVTLENASAVELATTIHNNVEATDANATQADQPTQEPESEPAQVSEASADQVATTNAGTANTTPPEKRWPGWPGDCVFRLIVPVLKVGSIIGRKGELIKKMCEETRARIRVLDGAVGTPDRIVLISGKEEPEASLSPAMDAVIRVFKRVYGLSESDSENKASGPAGVAFVSVRLLVASTQAINLIGKQGSLIKSIQENTGASARVLSGDEVPFYAAADERIVELQGEALKVLRALEAVVGHLRKFLVDHSVLPLFEKKTYNATVPQDRQADAWADKSSLHTGSQTSINADIPLSTKRDSLFADRENQLDSQLPSSAMSLYGQDSSLSGVRSSALSRTGGPIVTTVIQTMQIPLSYAEDIIGIQGTNIAYIRRTSGAILTVQESRVPDEIIVEIKGTSSQVQLAQQLIQEVISNHKEPVLNSYSRLDAGLRSSYSQLGASTSYSSSSIASQPYTGYGSSGLGGYSTFRL 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g0134 488 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 88 150 IPR036612 GO:0003723
Bisa02g0134 488 SMART kh_6 363 432 IPR004087 GO:0003676
Bisa02g0134 488 SMART kh_6 94 167 IPR004087 GO:0003676
Bisa02g0134 488 SMART kh_6 188 263 IPR004087 GO:0003676
Bisa02g0134 488 ProSiteProfiles Type-1 KH domain profile. 95 162 - -
Bisa02g0134 488 MobiDBLite consensus disorder prediction 1 22 - -
Bisa02g0134 488 Pfam KH domain 192 258 IPR004088 GO:0003723
Bisa02g0134 488 Pfam KH domain 98 150 IPR004088 GO:0003723
Bisa02g0134 488 Pfam KH domain 367 429 IPR004088 GO:0003723
Bisa02g0134 488 PANTHER KH DOMAIN CONTAINING RNA BINDING PROTEIN 84 452 - -
Bisa02g0134 488 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 187 270 IPR036612 GO:0003723
Bisa02g0134 488 ProSiteProfiles Type-1 KH domain profile. 189 258 - -
Bisa02g0134 488 ProSiteProfiles Type-1 KH domain profile. 364 427 - -
Bisa02g0134 488 MobiDBLite consensus disorder prediction 38 83 - -
Bisa02g0134 488 CDD KH-I_PEPPER_rpt2_like 191 263 - -
Bisa02g0134 488 CDD KH-I_PEPPER_rpt1_like 95 163 - -
Bisa02g0134 488 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 360 433 IPR036612 GO:0003723
Bisa02g0134 488 Gene3D K Homology domain, type 1 363 437 IPR036612 GO:0003723
Bisa02g0134 488 Gene3D - 95 266 - -
Bisa02g0134 488 MobiDBLite consensus disorder prediction 38 90 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g0134 Bisa-ChrBisa02 1667126 1674883 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa02g0134 02 1667126 1674883 Bisa02g0134 02 1667126 1674883 ECH