LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bisa02g0126	ATGCGCTCAGGAGGTTGTGCATTACAGCAGACCCTCACATCGGAGGCTGCTTCGGTGTTGAAGCATTCTCTGGGCTTGGCTCGTAGGAGGGGCCATGCCCAGGTCACTCCTCTCCACGTGGCTGCCACCTTGCTCAGCCTTAGAGCTAGCTCCTTCAGAAGGGCTTGTCTCAAATCTCATCCTCATCATCACCAAGCTTCTTCCCATTCACATCATCCTCTCCAATGCAGAGCCCTTGAGCTCTGCTTCAATGTGGCTCTCAATAGGCTCCCAACCACACCAACCCCAAATCTGCTTCACACTCAGCAGCCTTCTCTTTCAAATGCTCTAATTGCTGCTTTAAAAAGAGCTCAGGCTCACCAGAGGAGGGGGTGCATAGAACAGCAGAACCAGCAGCCGCTTTTGACCATAAAGGTAGAGCTTGAACAGCTCGTTATATCTATTCTAGATGACCCTAGTGTTAGCAGGGTTATGAGAGAGGCTGGGTTCTCTAGTACTGCTGTGAAAAGCAGTATAGAGGACTCTTCACCCCCTTGTTCTGTTTTCCAGTGTTACAACAGTTCTGGTGGTGTCTTTTCTTCTCCTTGCTCTCCGTCTCCGAGTGAAAACCAGAGGGAAACCATAAATTCCAATAGCAGTTTCAGGCAGACCCATTTCTTGGCTTCTGCAGCTGCTGCTTATACTTCAGAGTACTACAACCCAGTTCTTTTCTCTCCTCAGAAGAGAACCCCAGTGTACCCTATAACTGAATCAACTTCATCTAAGGAAGATATTAAACTGGTTTTGGATGTGCTCTTGAGGAAGAAGAAGAAGAACACTGTGATAGTTGGGGATTCTGTGTCCCTCACTGAGGGCCTCATAGGAGAGCTGGTGGGAAGATTAGACAGAGGAGAGGTTCCTGATGAGTTGAAGTCAACCCATTTCATCAAGTTTCAATTTGCGCAAGTTTCTTTAAGGTTTATGAAAAGAGATGAAGTTGAAATGAGACTAATGGAGCTGAAAAGGAAGGTGGACTCAATTGCATCAAGAGGAGGAGGAGCCATTTTTTATATTGGAGATCTGAAATGGACAGCGGAGGTCTCCAGTGAGAAAGAGGAGGAAGGAGTAGAAGTCTCTGATTCCAACGCAGTGGATCATCTAGTTGCAGAAATAGGAAATTTGTTCTCTGACTATGGAAGCTCATCAAACAGTAAGGTATGGCTGATGGCCACTGCGAGTTACCAAACATACATGAGGTGTCAAAAGAGGCAGCCCCCTCTTGAAACCCAGTGGTCTCTTCAGGCAGTTCTCGTTCCATCAGGTGGTCTTGGCTTGAGCCTCCACGCTTCCGGAATCCTTGATTCAAAGATGACCATCTCCCATACTCCATCCCATGTGCTGGAAAAGAAGCTCTTCAGAGATAGGGAGGAGCAGGATAAGCTCGCTTGCTGTGAAGAATGTGCCGCTAACTATGAAAAAGAAGCTCAATTGTTAAATCCAGGCCAGACCAAACTTTTGCCTTCCTGGCTTCAGTCTCATAGCTTCGAAGCCAATCATAAGGAGGAATTAACCCAGTTAAGAAGAAAGTGGAGTAGACTATGTCACTATCTCCACCAAAGCAAGCATTATCAGAACCACTGGAACAACAGTTTACACAGCAATCACAGTTCAAATATGAATATCTATCCCTATAATTCTTCATATCCGTTGTGGCCAAAACAAGGCAGCATCCTCCCAGATTCAAGTTCTATATCATTTGCAGACTCTGTCACTAAACCCACTCATAGCTCCAATCTTGTACCTCGATTCCGACGCCAACAGTCATGCATTATTGAGTTCGATTTTAGCAACGGAACCCAGAAACAGCAGCAAGCAACTACTGAAGAGCCAAGCTTGGATTCTCTTAAGGGAATGGAAGGTAAAGAAGTAAAGATTACTCTTGCTCTTGGGAATTTCCCATTCGGTGGTTCAGAGCAAAGGGAGGAAAAAAATAAATGTGATACACCACAGCGAAGAGCTCATGTTTGTAAACTATTGCAGGAGAATGTGCCATGGCAATCTGATACAATCCCTTCAATAGCAGAGGCCTTGGTTGATTCCAAACCACAAAAGCAAAACACTACTCGGTTGATTTTGCAGGGCAATGACTCTATAGGGAAAAGAAGGTTGGCTCATGCAATTGCAGAATCGCTCTTTGGCTCAGCTGATCTGCTTTTTCACTTAGACATGAAGAAAAAGGAGACTCCAGCAGCTTCGCCCTCTGAAATGCTGACCAGGGCTTTGAAAACCCATGAAAAGCTCGTCGTCTTGATAGAAGACTTTGATTTGGCCGATACACATTTCAAGAAATTCCTCGCAGATTGTTATGAAACAGGAAACTTTGGCCCAAAAATATTCATAATGACGAACGGTGGCTCAGCGAGCAACGAAGAACAGACTCAGGACTCAGTGATGCAATTAACATTACAGGTCAGCGAAATCAAGCCGAACTTGGAGATACATTGCGTGGGCCACAAGCGAAAACCGGAATTTGATCTATTTCCCAAAATCAAAAACCCCAGAATGGAAGAGAAGGACGAGGAATCAAACAGAAAGAAAGACTTCTCGAGGCAGTCGAGCTTCAACACCCTTGATCTCAACTTAAGAGCCGATGAAGTCAACAACGTCGACGACGGTGAAGGGGGAAGCAGCCCTATCTCGAGCGATCTGACTCGAGAAACCATCCCCGATTCCTTAAACCCCAATGGGTTTCTCAATTCGATCGAGAAGCCATTCGAGTTCAATCGAAGCCCGGCACGGGAGAGGGAGATGGCAGAGTTCTTCTATACGAAAATCAAAGGGTGTTTTGAAGAAATCTATGGGAAGCAGAATGCGGGGAATTTGGGCATAGAAGAGAGGGTGATAGAGGGAATGGTGGGAGGGTGTGGTTCTTTTACTAACAGTGTGTTTGAGAAATGGCTGAAAGACATTTTTCAAAGAAGCATAGAAACAGTTAACTCTGTGGGGAAGGAGGGTATAGGTTATAGAGTTTGTTGGGGTGGAATTGGAATTGGCAAAGGTAAAGGTAAAGGAAAAGGTAAAGAAGAGGGAATTAGGGTTTTGGATAGTGAAGAAGGTGGGTTCATGAGTTCATGTCTGCCAAAGAACATCCAAGTTAACTACTTCATGGATTGA	3153	0.4529	MRSGGCALQQTLTSEAASVLKHSLGLARRRGHAQVTPLHVAATLLSLRASSFRRACLKSHPHHHQASSHSHHPLQCRALELCFNVALNRLPTTPTPNLLHTQQPSLSNALIAALKRAQAHQRRGCIEQQNQQPLLTIKVELEQLVISILDDPSVSRVMREAGFSSTAVKSSIEDSSPPCSVFQCYNSSGGVFSSPCSPSPSENQRETINSNSSFRQTHFLASAAAAYTSEYYNPVLFSPQKRTPVYPITESTSSKEDIKLVLDVLLRKKKKNTVIVGDSVSLTEGLIGELVGRLDRGEVPDELKSTHFIKFQFAQVSLRFMKRDEVEMRLMELKRKVDSIASRGGGAIFYIGDLKWTAEVSSEKEEEGVEVSDSNAVDHLVAEIGNLFSDYGSSSNSKVWLMATASYQTYMRCQKRQPPLETQWSLQAVLVPSGGLGLSLHASGILDSKMTISHTPSHVLEKKLFRDREEQDKLACCEECAANYEKEAQLLNPGQTKLLPSWLQSHSFEANHKEELTQLRRKWSRLCHYLHQSKHYQNHWNNSLHSNHSSNMNIYPYNSSYPLWPKQGSILPDSSSISFADSVTKPTHSSNLVPRFRRQQSCIIEFDFSNGTQKQQQATTEEPSLDSLKGMEGKEVKITLALGNFPFGGSEQREEKNKCDTPQRRAHVCKLLQENVPWQSDTIPSIAEALVDSKPQKQNTTRLILQGNDSIGKRRLAHAIAESLFGSADLLFHLDMKKKETPAASPSEMLTRALKTHEKLVVLIEDFDLADTHFKKFLADCYETGNFGPKIFIMTNGGSASNEEQTQDSVMQLTLQVSEIKPNLEIHCVGHKRKPEFDLFPKIKNPRMEEKDEESNRKKDFSRQSSFNTLDLNLRADEVNNVDDGEGGSSPISSDLTRETIPDSLNPNGFLNSIEKPFEFNRSPAREREMAEFFYTKIKGCFEEIYGKQNAGNLGIEERVIEGMVGGCGSFTNSVFEKWLKDIFQRSIETVNSVGKEGIGYRVCWGGIGIGKGKGKGKGKEEGIRVLDSEEGGFMSSCLPKNIQVNYFMD	1050

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bisa02g0126	1050	MobiDBLite	consensus disorder prediction	886	900	-	-
	Bisa02g0126	1050	PANTHER	CHAPERONE PROTEIN CLPD, CHLOROPLASTIC	1	997	-	-
	Bisa02g0126	1050	FunFam	protein SUPPRESSOR OF MAX2 1	9	177	-	-
	Bisa02g0126	1050	MobiDBLite	consensus disorder prediction	842	864	-	-
	Bisa02g0126	1050	MobiDBLite	consensus disorder prediction	878	900	-	-
	Bisa02g0126	1050	Coils	Coil	323	343	-	-
	Bisa02g0126	1050	SUPERFAMILY	Double Clp-N motif	12	173	IPR036628	-
	Bisa02g0126	1050	MobiDBLite	consensus disorder prediction	842	861	-	-
	Bisa02g0126	1050	Gene3D	-	243	432	IPR027417	-
	Bisa02g0126	1050	Gene3D	-	650	849	IPR027417	-
	Bisa02g0126	1050	Gene3D	-	9	176	IPR036628	-
	Bisa02g0126	1050	ProSiteProfiles	Clp repeat (R) domain profile.	8	178	IPR004176	-
	Bisa02g0126	1050	Pfam	Clp amino terminal domain, pathogenicity island component	26	46	IPR004176	-
	Bisa02g0126	1050	Pfam	Clp amino terminal domain, pathogenicity island component	139	174	IPR004176	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bisa02g0126	Bisa-ChrBisa02	1559742	1563345	Dispersed/Wgd

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Bisa02g0126	02	1559742	1563345	Bisa02g0126	02	1559742	1563345	ECH