Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g0117 ATGTTGTATGAAAATCAAGGGGTTCATCATGATTACCAGCCAATGTTACGGATGGGTGTGGGAATGGATATGGAAATGAAGAAGAAGAAAAGAAGTGAGAATCAGAGGAGATCAAGCGGTGGAATGAGAGAGGAAGAGAGGGTTGAGACCGTTGATCTCAGTGGTTTGGCCTTGGAAACTCTTCCAAACCCTTCTTTCAGTTTAGCTTCCATTACCAAGTTGGACCTCTCCAACAACAATCTTCAGAACATTCCGGAGTCGTTGACGGCGAGATTGCTGAACGTGGTGGTGCTGGACGTGCACTCGAATCAACTGACGTGCCTCCCAAACTCCATAGGCTGCCTCTCAAAGCTAAAACTCTTGAATGTCTCCGGCAACCTCATCGAATCCTTCCCCAAAACCATTGAGAATTGCAGAGCTTTGGAAGAACTGAATGCCAACTTTAACAAGCTACGTATGCTGCCAGAAGCCATAGGGTTTGAACTCATCAACCTCAAGAAGCTATCAGTGAACTCCAACAAGCTTGTGTTTCTTCCTCAATCCACCTCTCACCTCACGGCTCTTCGCGTCCTCGATGCTCGCCTGAACTGCCTCCGAGCCCTCCCGGACGACCTCGAGAATCTCATCAACCTTGAAACCCTAAATGTGAGCCAAAACTTCCATTACCTTGAAACCCTGCCTTACTCTATAGGTCTCCTCTTGTCCCTTGTTGAACTTGACATTAGCTACAACAAGATCAAGTATTTGCCAGAGTCTATTGGGTGCCTCAAGAATTTGCAGAAGCTAAGTGTGGAAGGAAACCCTCTGAAGTCGCCTCCTAAGGAAGTGATGAATCAAGGTGTGCAAGCAATAAAGGAGTATATGTGCCAGAAGATGAACTCAGGGCAGAGCCCACCAAAGAAGAAATCTTGGGTGGGGAAGTTGGTGAAGTATGGTACCTTCAATGGATCACGTTTGAGGTGTGGGGCTCGAGAAGATCGAGAGGATTTCTCTGCCATGGAAGGCTTTGCTTCACCAAGGTCGTCAATTGGCATGTTCTCACCACGTCGCCTTTTCTCGCCTCGTAATCATTCCACTAATTAA 1083 0.4709 MLYENQGVHHDYQPMLRMGVGMDMEMKKKKRSENQRRSSGGMREEERVETVDLSGLALETLPNPSFSLASITKLDLSNNNLQNIPESLTARLLNVVVLDVHSNQLTCLPNSIGCLSKLKLLNVSGNLIESFPKTIENCRALEELNANFNKLRMLPEAIGFELINLKKLSVNSNKLVFLPQSTSHLTALRVLDARLNCLRALPDDLENLINLETLNVSQNFHYLETLPYSIGLLLSLVELDISYNKIKYLPESIGCLKNLQKLSVEGNPLKSPPKEVMNQGVQAIKEYMCQKMNSGQSPPKKKSWVGKLVKYGTFNGSRLRCGAREDREDFSAMEGFASPRSSIGMFSPRRLFSPRNHSTN 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g0117 360 PRINTS Leucine-rich repeat signature 71 84 - -
Bisa02g0117 360 PRINTS Leucine-rich repeat signature 233 246 - -
Bisa02g0117 360 MobiDBLite consensus disorder prediction 26 48 - -
Bisa02g0117 360 ProSiteProfiles Leucine-rich repeat profile. 235 256 IPR001611 GO:0005515
Bisa02g0117 360 Gene3D Ribonuclease Inhibitor 161 290 IPR032675 -
Bisa02g0117 360 Gene3D Ribonuclease Inhibitor 22 158 IPR032675 -
Bisa02g0117 360 ProSiteProfiles Leucine-rich repeat profile. 70 91 IPR001611 GO:0005515
Bisa02g0117 360 PANTHER - 162 280 - -
Bisa02g0117 360 SMART LRR_typ_2 185 208 IPR003591 -
Bisa02g0117 360 SMART LRR_typ_2 233 255 IPR003591 -
Bisa02g0117 360 SMART LRR_typ_2 256 279 IPR003591 -
Bisa02g0117 360 SMART LRR_typ_2 92 114 IPR003591 -
Bisa02g0117 360 SMART LRR_typ_2 68 91 IPR003591 -
Bisa02g0117 360 SMART LRR_typ_2 139 161 IPR003591 -
Bisa02g0117 360 SMART LRR_typ_2 162 184 IPR003591 -
Bisa02g0117 360 SMART LRR_typ_2 115 138 IPR003591 -
Bisa02g0117 360 SMART LRR_bac_2 115 134 - -
Bisa02g0117 360 SMART LRR_bac_2 208 229 - -
Bisa02g0117 360 SMART LRR_bac_2 92 111 - -
Bisa02g0117 360 SMART LRR_bac_2 233 252 - -
Bisa02g0117 360 SMART LRR_bac_2 256 275 - -
Bisa02g0117 360 SMART LRR_bac_2 138 157 - -
Bisa02g0117 360 SMART LRR_bac_2 68 87 - -
Bisa02g0117 360 SMART LRR_bac_2 162 181 - -
Bisa02g0117 360 SUPERFAMILY L domain-like 47 273 - -
Bisa02g0117 360 Pfam Leucine rich repeat 70 128 IPR001611 GO:0005515
Bisa02g0117 360 Pfam Leucine rich repeat 164 219 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g0117 Bisa-ChrBisa02 1183916 1187795 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g0117 66 316 Receptor kinase-like Gene Family AT5G51350 29.811 8.62e-14 70.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa02g0117 02 1183916 1187795 Bisa02g0117 02 1183916 1187795 ECH