Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g0089 ATGAGGGATAAAATTAGACTCTGTTCCTTGCAGTTCTTAAAGCTTATCAATACTAGTAAGGAAAAAAGGGTGGGCATCGAGACCATGATTCCTGGTTGTATAACTGTAGTTCTTTCCAACCTTATGAAGTATGGACTGACAGTATTGGGATTTCAAGTGATGGGATACCATCTACTTCTAGACATGAATTTTGCTGCCTTAGCATATTATTATTCTCCTTTTGTGTTTTCCCGTAAAATGATGCAGGAAAGCAATAGGACTAGGTATGCTGCTATTTTCGCTGCATTTGTTGCTGGGATGGCCTGTATGGTTGGTGTTGACTTCAGTGAAAAATTCATGGCCTCTTTTGCCAAATGCTTTGAGGTACAAACCAGCGAAGAAGAAGATGCTGAAGACAGAGAGAGACCGGAGACGCTGAAGATAGAGAGATACGCAGAGAGAGTGACGCCGAAAGCAGAAGAATCCGAGGGAGGTAGAGACACCATGGAGACTCCGCAGCAGGGAGGAGTGGTGAAGAAGAAGGAGACCAGGGGTCGAAAGCCCAAGCCCAAGGACGACAAGAAGGATGAGCAGCAGCAGCAGCAGCATGGGAAGACCACCAAGGAGACCAAGAAATCTCAGCAGCCTCCCTCCGTCGACGAAAAGTACACCCAGTGGAAGTCCCTCGTCCCAGTTCTCTATGACTGGCTCGCCAATCACAACCTCGTTTGGCCCTCTCTCTCCTGCCGGTGGGGTCCTCAGCTTGAGCAAGCTACTTACAAGAATCGCCAGCGTCTCTACCTTTCTGAGCAGACTGATGGTAGTGTGCCAAATACTCTGGTCATTGCAAACTGTGAGGTTGTGAAGCCTAGGGTTGCAGCTGCAGAGCACATTTCACAGTTTAATGAAGAGGCACGCTCACCATTTGTGAAGAAGTACAAGACTATCATACATCCGGGAGAGGTTAACAGAATTAGGGAATTGCCAACAAATTCTAAGATAGTGGCTACCCATACAGATAGTCCTGATGTCCTCATTTGGGATGTTGAAACTCAACCTAATCGTCATGCTGTCCTTGGAGCTACCAACTCTCGTCCAGATTTGATATTGACTGGACACCAGGATAATGCAGAATTTGCACTTGCAATGTGTCCAACCGAACCCTATGTGCTTTCTGGAGGAAAGGACAAATCGGTGGTTTTGTGGAGTATCCAGGACCATATATCATCTTCTGCCACAGATGCAAAATCTGGTGAATCAAATGTCAAACAGAACTCCAAATCTGGGGAAGGCAATGATAAAACTGCTGATGGGCCATCTGTTGGACCACGAGGCATCTTTCATGGGCATGAGGATACTGTTGAAGATGTGACTTTTTGCCCTTTTAGTGCACAGGAGTTCTGTAGCGTTGGGGATGATTCTTGTCTCATATTATGGGACGCACGTGTTGGCACTAGTCCTGTGGTTAAGGTTGAAAAAGCTCATAATGCTGATCTTCATTGTGTTGACTGGAATCCCAATGATGTTAATCTTATTCTAACTGGGTCAGCAGATAACTCTGTTCGCATGTTTGACCGGCGTAATCTTACCTCTAATGGAATTGGGTCACCTATCCATAAATTTGAGGGTCACAAAGCTGCTGTTCTTTGTGTTCAGTGGTCTCCAGACAAATCATCTGTATTTGGAAGTTCTGCAGAAGATGGTCTCTTAAACATTTGGGATTACGAGAAGATTGGCAAAAAGACAGAGCGATCTGGAAAATCACAAAGTTCTCCTGGGTTGTTGTTCCAGCATGCTGGCCATAGAGACAAGGTTGTTGACTTCCACTGGAATGCATATGATCCATGGACTATTGTTAGTGTTTCTGACGACTGTGATAGTACCGGTGGAGGGGGAACATTGCAGATATGGCGCATGAGTGACTTGATCTACCGACCAGAAGAGGAGGTGTTAGCAGAGCTTGAGAAATTTAAGTCTCATGTGGTGGAATGTGCTTCGAAGTCTGAAAAGTGA 1992 0.4553 MRDKIRLCSLQFLKLINTSKEKRVGIETMIPGCITVVLSNLMKYGLTVLGFQVMGYHLLLDMNFAALAYYYSPFVFSRKMMQESNRTRYAAIFAAFVAGMACMVGVDFSEKFMASFAKCFEVQTSEEEDAEDRERPETLKIERYAERVTPKAEESEGGRDTMETPQQGGVVKKKETRGRKPKPKDDKKDEQQQQQHGKTTKETKKSQQPPSVDEKYTQWKSLVPVLYDWLANHNLVWPSLSCRWGPQLEQATYKNRQRLYLSEQTDGSVPNTLVIANCEVVKPRVAAAEHISQFNEEARSPFVKKYKTIIHPGEVNRIRELPTNSKIVATHTDSPDVLIWDVETQPNRHAVLGATNSRPDLILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHISSSATDAKSGESNVKQNSKSGEGNDKTADGPSVGPRGIFHGHEDTVEDVTFCPFSAQEFCSVGDDSCLILWDARVGTSPVVKVEKAHNADLHCVDWNPNDVNLILTGSADNSVRMFDRRNLTSNGIGSPIHKFEGHKAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKIGKKTERSGKSQSSPGLLFQHAGHRDKVVDFHWNAYDPWTIVSVSDDCDSTGGGGTLQIWRMSDLIYRPEEEVLAELEKFKSHVVECASKSEK 663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g0089 663 ProSiteProfiles Trp-Asp (WD) repeats profile. 440 482 IPR001680 GO:0005515
Bisa02g0089 663 SUPERFAMILY WD40 repeat-like 301 648 IPR036322 GO:0005515
Bisa02g0089 663 ProSiteProfiles Trp-Asp (WD) repeats profile. 534 569 IPR001680 GO:0005515
Bisa02g0089 663 PANTHER WD40 REPEAT FAMILY 205 646 - -
Bisa02g0089 663 ProSiteProfiles Trp-Asp (WD) repeats profile. 485 518 IPR001680 GO:0005515
Bisa02g0089 663 MobiDBLite consensus disorder prediction 170 209 - -
Bisa02g0089 663 MobiDBLite consensus disorder prediction 133 160 - -
Bisa02g0089 663 SMART WD40_4 584 631 IPR001680 GO:0005515
Bisa02g0089 663 SMART WD40_4 433 473 IPR001680 GO:0005515
Bisa02g0089 663 SMART WD40_4 356 396 IPR001680 GO:0005515
Bisa02g0089 663 SMART WD40_4 478 518 IPR001680 GO:0005515
Bisa02g0089 663 SMART WD40_4 527 567 IPR001680 GO:0005515
Bisa02g0089 663 SMART WD40_4 302 341 IPR001680 GO:0005515
Bisa02g0089 663 MobiDBLite consensus disorder prediction 405 426 - -
Bisa02g0089 663 Gene3D - 187 649 IPR015943 GO:0005515
Bisa02g0089 663 Pfam Histone-binding protein RBBP4 or subunit C of CAF1 complex 214 280 IPR022052 -
Bisa02g0089 663 MobiDBLite consensus disorder prediction 405 441 - -
Bisa02g0089 663 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 485 518 - -
Bisa02g0089 663 MobiDBLite consensus disorder prediction 124 215 - -
Bisa02g0089 663 Pfam WD domain, G-beta repeat 486 518 IPR001680 GO:0005515
Bisa02g0089 663 Pfam WD domain, G-beta repeat 528 567 IPR001680 GO:0005515
Bisa02g0089 663 Pfam WD domain, G-beta repeat 438 473 IPR001680 GO:0005515
Bisa02g0089 663 Pfam WD domain, G-beta repeat 361 396 IPR001680 GO:0005515
Bisa02g0089 663 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 534 569 - -
Bisa02g0089 663 FunFam WD-40 repeat-containing protein MSI4 189 649 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g0089 Bisa-ChrBisa02 837187 860830 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g0089 440 602 Miscellaneous Gene Families AT5G08390 25.301 9.45e-06 47.0
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa02g0089 02 837187 860830 Bisa02g0089 02 837187 860830 ECH