Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g4070 ATGGAGATCACTGGCTCGAAGAAGAAAAGTGGTGGAAATGGACAGGTTCTGGACGGTTCGAATATTATGGAGTTAGTTGGAAACGAGCAAGTCTTCAGCAATTTCGTGGACCATAAGTTTCAGGAGCTCGATAGGGACAGAGACGGGAAGCTCTCCGTGAAGGAGCTCGAGCCTGCCGTTGCTGATATTGGTGCCGCTCTCGGCTTGCCGGCTCAGGGAACTAATCCTGATTCCGATCACATCTATTCTGAGGTCTTGAATGAGTTCACCCATGGCAAGCAAGAGAGAGTAAGCAAGACTGAGTTCAAAGAGGTACTCTCAGACATTCTGTTGGGCATGGCTGCTGGGCTGAAGCGAGACCCAATTTTGATACTGCGTATAGATGGGGAAGATCTCCTTGAATTTGTTAATGGGCCAAGTTATGAGGCAGAAATGGCATCCATATTCTCCCAGATTGATTCCCCTGATGGATCACTTAATGAACATATAGTTCAAGCTCTGGGAAAACTCACTGTTGAACAAGGAATTCCTCCTACTTCAGATTCTTGGGTTTATAATAATATCGTGGAACCAGCTCTGCAATCTCAAGCAGGCCCGGATTGGGATAGACCAGTTTCTCAAGAGACATTTTTGGTGGAATTTAAGAAAGTGGCATCGAGCGTGGCTGATCGTCTGAAGGAGCAACCTGTTATAGTTGCTCACAGTGAGAACACCTTTGATGGAAGTGGCATTAAGAGACTATTATCCAACAAGTTTGAATTAGACAAGACATTAAACGCAGCTTTAGAAAATATACCAAAAGATCGCAATGGAAAATTGTCAAAGGAGTATCTGCGGGTGGCACTAGATGTGGTGTCTCCATCTGCTGGTTTGCCTCCAGTTGGTGCAATTGAAGAGATGGATAAAGTTATTGATGAAGTCTTCAAGATGATAAATGCAGATGACGGGAAGATGGTTAAAGAAGACGAATTCAAGAAAATATTGACTGAAATACTGGGGAGTATCATGTTGCAGTTAGAGGGCAATCCCATATCAATTTCTTCAAATTCAGTTGTGCATGAGCCTCTAGGCTCTACTTCCTCACTTTTGCAGCCGTCTACTAGTGAAACGGCTTAA 1116 0.4409 MEITGSKKKSGGNGQVLDGSNIMELVGNEQVFSNFVDHKFQELDRDRDGKLSVKELEPAVADIGAALGLPAQGTNPDSDHIYSEVLNEFTHGKQERVSKTEFKEVLSDILLGMAAGLKRDPILILRIDGEDLLEFVNGPSYEAEMASIFSQIDSPDGSLNEHIVQALGKLTVEQGIPPTSDSWVYNNIVEPALQSQAGPDWDRPVSQETFLVEFKKVASSVADRLKEQPVIVAHSENTFDGSGIKRLLSNKFELDKTLNAALENIPKDRNGKLSKEYLRVALDVVSPSAGLPPVGAIEEMDKVIDEVFKMINADDGKMVKEDEFKKILTEILGSIMLQLEGNPISISSNSVVHEPLGSTSSLLQPSTSETA 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g4070 371 PANTHER CALCIUM-BINDING EF-HAND FAMILY PROTEIN-RELATED 127 351 - -
Bisa01g4070 371 Gene3D - 132 342 - -
Bisa01g4070 371 ProSitePatterns EF-hand calcium-binding domain. 44 56 IPR018247 -
Bisa01g4070 371 SUPERFAMILY EF-hand 39 342 IPR011992 -
Bisa01g4070 371 Pfam EF-hand domain pair 39 105 IPR002048 GO:0005509
Bisa01g4070 371 Gene3D - 15 117 - -
Bisa01g4070 371 ProSiteProfiles EF-hand calcium-binding domain profile. 31 66 IPR002048 GO:0005509
Bisa01g4070 371 SMART efh_1 35 63 IPR002048 GO:0005509
Bisa01g4070 371 SMART efh_1 257 285 IPR002048 GO:0005509
Bisa01g4070 371 SMART efh_1 303 331 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g4070 Bisa-ChrBisa01 97869036 97872675 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g4070 15 368 EF-hand Containing Proteins AT4G38810 69.748 5.30e-178 497
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa01g4070 01 97869036 97872675 Bisa01g4070 01 97869036 97872675 ECH