Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g3975 ATGGGTCACGTGGGTAGGGTGTGTTGGGCTCAGGGTGGGCCGCAACGCATACGAACCATAAACACAGATATGATGTCTCATCATCCCTTAACTGGATTCCCATTTTTGTGTAAAGGTGCTTGGAATAGACTCTTCTATTTGGTAGTTGAGCTCTCTGGTTCTTCAATGTCTTCTTCCTGTGTGACCTTGAGAGCCAATACCCATTTCCCAAATGGAAGAAGGGGAGATTTCTTTCGTCAGGAAAATGGATTTTTAGGGGAAAGAATCAGGACCCTGAATTGCAGTAGTCCCTATGTTGCAAATCAGTTGGCTACATGTTTTGGAAACGAGAAGAGGGTCAAGAAGGTCAAGAAAACCAGTGTTGTTTCTTCTGTTCTTACAACAAATGATGCCAAAGAAGCTCTGACCCTGCAGGTGCCTTCGTTTCTCAGAAGAAGGGCTGACCTCAAAAATGTGGTTTCCATCATATTGGGAGGAGGACCTGGAAAACAACTCTTTCCCCTTACCAAACGAACTGCAACACCTGCTGTACCTGTTGGTGGATGCTACAGACTTATTGACGTCCCAATGAGTAACTGTATCAACAGTGGGATCAACAAAATATTTGTACTCACCCAATTCAACTCTGCACCCTTGAACCGCCATATTTCACGCACCTACTTTGGAAATGGCATCAACTTTGGGGATGGATTTGTGGAGGTCCTGGCAGCTACTCAAACACCGGGAGAAGCAGGGAAGAAGTGGTTTCAAGGAACAGCAGATGCTGTGAGACAATTCACATGGGTATTTGAGGATGCTAAGAACACAACCGTTGAGAATGTATTGATCTTGGCAGGCGATCATCTATACCGAATGGATTACACGGACCTGATACAGAGTCACGTTGACAGAAATGCTGATATTACAATTTCATGCGCAGTAGTGGGCGACAGCCGTGCACCAGATTATGGATTGGTCAAGGTAGATGGCAGGGGACGCGTCACTCAATTTTCGGAAAAACCAAAGGGTGCTGATCTGAAAGCAATGCAAGTAGATACCTCTTTTATCGGGTTGTCACGCCAAGAGGCGGCAAGGTCACCATATATTGCATCCATGGGGGTGTATGTATTCAAGACAGATTTTTTACTTAAGCTTCTGAAATGGAGATATCCTACATCCAACGACTTCGGATCTGAAATCATTCCTGCCGTTGTGAGGGAACACGATGTCGAAGCATATTTTTTCAGAGACTACTGGGAAGACATTGGAACAATAAGGTCATTTTACGATGCAAACCTTGCTCTTACCGAGGAGCATCCACAGTTTAAATTTTATGATCCCAAGACACCTATTTTTACATCTCCTCGTTTCCTGCCACCATCAAAGATCGATAAGTGTCGGATTGTGGATGCAATTATCTCCCATGGATGTTTTTTGCGAGAATGTACGGTCCAGCATTCCATTGTCGGTGAACGTTCACGTTTGGATTACGGCGTTGAGCTCCAGGACACTGTGATGATGGGAGCAGACTATTACCAAACCGAATCTGAAATTGCTTCTCTGCTAGCGGAAGGGAAGGTCCCAATGGGGATTGGAAGGAATACCAAACTTAGGAACTGTATAATCGACAAGAATGCAAAAATCGGGAAAGATGTCCTCATCATGAACAAAGATGGTGTCCAAGAAGCTGATAGACCTGATGCCGGATTCTACATTCGATCGGGCATAACCGTCATCATGGAGAAGGCAACCATAGAAGATGGGACTGTCATATAA 1755 0.4479 MGHVGRVCWAQGGPQRIRTINTDMMSHHPLTGFPFLCKGAWNRLFYLVVELSGSSMSSSCVTLRANTHFPNGRRGDFFRQENGFLGERIRTLNCSSPYVANQLATCFGNEKRVKKVKKTSVVSSVLTTNDAKEALTLQVPSFLRRRADLKNVVSIILGGGPGKQLFPLTKRTATPAVPVGGCYRLIDVPMSNCINSGINKIFVLTQFNSAPLNRHISRTYFGNGINFGDGFVEVLAATQTPGEAGKKWFQGTADAVRQFTWVFEDAKNTTVENVLILAGDHLYRMDYTDLIQSHVDRNADITISCAVVGDSRAPDYGLVKVDGRGRVTQFSEKPKGADLKAMQVDTSFIGLSRQEAARSPYIASMGVYVFKTDFLLKLLKWRYPTSNDFGSEIIPAVVREHDVEAYFFRDYWEDIGTIRSFYDANLALTEEHPQFKFYDPKTPIFTSPRFLPPSKIDKCRIVDAIISHGCFLRECTVQHSIVGERSRLDYGVELQDTVMMGADYYQTESEIASLLAEGKVPMGIGRNTKLRNCIIDKNAKIGKDVLIMNKDGVQEADRPDAGFYIRSGITVIMEKATIEDGTVI 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g3975 584 PANTHER GLUCOSE-1-PHOSPHATE ADENYLYLTRANSFERASE-RELATED 109 584 IPR011831 GO:0005978|GO:0008878
Bisa01g3975 584 CDD LbH_G1P_AT_C 452 578 - -
Bisa01g3975 584 ProSitePatterns ADP-glucose pyrophosphorylase signature 3. 363 373 IPR005836 GO:0005978|GO:0008878
Bisa01g3975 584 CDD ADP_Glucose_PP 155 415 - -
Bisa01g3975 584 Gene3D Hexapeptide repeat proteins 450 584 - -
Bisa01g3975 584 FunFam Glucose-1-phosphate adenylyltransferase 134 449 - -
Bisa01g3975 584 Pfam Nucleotidyl transferase 154 430 IPR005835 GO:0009058
Bisa01g3975 584 ProSitePatterns ADP-glucose pyrophosphorylase signature 1. 158 177 IPR005836 GO:0005978|GO:0008878
Bisa01g3975 584 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 141 449 IPR029044 -
Bisa01g3975 584 SUPERFAMILY Trimeric LpxA-like enzymes 446 584 IPR011004 -
Bisa01g3975 584 SUPERFAMILY Nucleotide-diphospho-sugar transferases 151 545 IPR029044 -
Bisa01g3975 584 ProSitePatterns ADP-glucose pyrophosphorylase signature 2. 248 256 IPR005836 GO:0005978|GO:0008878
Bisa01g3975 584 FunFam Glucose-1-phosphate adenylyltransferase 450 584 - -
Bisa01g3975 584 NCBIfam glucose-1-phosphate adenylyltransferase 152 548 IPR011831 GO:0005978|GO:0008878
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g3975 Bisa-ChrBisa01 95597071 95604530 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa01g3975 01 95597071 95604530 Bisa01g3975 01 95597071 95604530 ECH