Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g3922 ATGGCTGAAACTAAAGCAGAGAAGAGTCTTCAGGATTTTGATCCTCAAAAGAAACCCAAAAGGAACAAGTATGCTTTTGCTTGTGCAATTTTGGCCTCCATGAATTCCATCCTACTTGGTTATGATATCGGAGTGATGAGTGGAGCAGCGATATATATAAAAAGAGACCTGAAAGTTTCGGACGTGCAGATAGAGATCCTGCTCGGAATCATAAATCTGTACTCTCTGATAGGATCTTTCCTCGCCGGAAGAACCTCCGACTGGATCGGACGCCGGTACACGATCGTGCTCGCCGGAGCGATCTTCTTCGCCGGCGCCATTCTGATGGGATTTTCCACTGACTATACGTTCCTGATGTGCGGTCGGTTCGTCGCGGGCATCGGAATCGGCTACGGGCTGATGATCGCCCCCGTATACACCGCCGAGGTCTCTCCGGCGTCCTCTCGTGGCTTCCTCACATCCTTCCCAGAGATTTTCATAAATGGAGGAATATTACTTGGATACATATCAAATTATGCATTTTCCAAGCTGTCACTTCGACTGGGTTGGCGTCTCATGTTGGGAGTTGGCGCCGTTCCTTCAATAATCCTAGCCGTGGGGGTTCTAGCCATGCCTGAGTCACCTCGTTGGCTAGTCATGCGCGGTCGGCTCAGCGAAGCCAAAAAAGTTCTTGACAAAACATCAGACTCAAAAGAAGAAGCTCGACTAAGGCTAGCGGACATCAAGGAAGCTGCGGGCATTCCTGAAAGCTACAATGACGATGTCATTCAAGTGAACAGAAAGCAAAATCGCGGTGAAGGTGTATGGAAAGACCTATTCCTCCATCCAACGCCTGCCGTTCGACACATCTTAATCGCTGCCCTCGGAATTCACTTCTTCCAACAAGCCTCTGGCGTAGATGCTGTCGTTTTGTATAGCCCCACGATCTTTGAGAAGGTTGGGATCACATCAGATACTGATAAGCTCCTCGCAACCATAGCTGTTGGATTTGTGAAGACCATCTTCATCTTGATGGCTACGTTTCTGTTGGATCGGGTCGGTCGTCGCCCGTTGTTGTTGAGTAGTGTCGGGGGTATGGTGTTCTCACTTTTAACTCTTGCTGTGAGCCTCACAATCATTGACCATTCAAACACAAAGCTAATGTGGGCCGTTGGATTGAGTATCGCTACTGTGTTATCGTATGTTGCGACGTTCTCAATTGGTGCAGGTCCTATCACATGGGTCTATAGCTCTGAGATCTTTCCATTGAAGCTACGCGCTCAAGGTGCGGCTATGGGAGTTGTGGTGAATAGGGTAACAAGTGGGGTTATCTCAATGACCTTTTTGTCCCTACAGAAAGCTATCACTATAGGCGGGGCCTTCTTTTTGTTTGGGGCAATTGCAACTGTTGGATGGATCTTCTTCTTTATCATGCTCCCAGAAACACAGGGTAAAACTCTTGAAGAAATGGAAGGGTCTTTTGGTAAATTCACAAGGAGCTCAAGCTCAGCCAAAGAAGTTAATGATGAGAACAGTAACTGTAACGGTAACGGCCAAATCCAATTAGGGGCCAAATAG 1557 0.4772 MAETKAEKSLQDFDPQKKPKRNKYAFACAILASMNSILLGYDIGVMSGAAIYIKRDLKVSDVQIEILLGIINLYSLIGSFLAGRTSDWIGRRYTIVLAGAIFFAGAILMGFSTDYTFLMCGRFVAGIGIGYGLMIAPVYTAEVSPASSRGFLTSFPEIFINGGILLGYISNYAFSKLSLRLGWRLMLGVGAVPSIILAVGVLAMPESPRWLVMRGRLSEAKKVLDKTSDSKEEARLRLADIKEAAGIPESYNDDVIQVNRKQNRGEGVWKDLFLHPTPAVRHILIAALGIHFFQQASGVDAVVLYSPTIFEKVGITSDTDKLLATIAVGFVKTIFILMATFLLDRVGRRPLLLSSVGGMVFSLLTLAVSLTIIDHSNTKLMWAVGLSIATVLSYVATFSIGAGPITWVYSSEIFPLKLRAQGAAMGVVVNRVTSGVISMTFLSLQKAITIGGAFFLFGAIATVGWIFFFIMLPETQGKTLEEMEGSFGKFTRSSSSAKEVNDENSNCNGNGQIQLGAK 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g3922 518 SUPERFAMILY MFS general substrate transporter 14 484 IPR036259 -
Bisa01g3922 518 Coils Coil 217 244 - -
Bisa01g3922 518 CDD MFS_PLT 31 483 IPR044776 GO:0005351
Bisa01g3922 518 ProSitePatterns Sugar transport proteins signature 1. 82 99 IPR005829 GO:0016020|GO:0022857|GO:0055085
Bisa01g3922 518 Gene3D MFS general substrate transporter like domains 18 490 IPR036259 -
Bisa01g3922 518 Pfam Sugar (and other) transporter 28 485 IPR005828 GO:0016020|GO:0022857|GO:0055085
Bisa01g3922 518 ProSiteProfiles Major facilitator superfamily (MFS) profile. 28 476 IPR020846 GO:0022857
Bisa01g3922 518 ProSitePatterns Sugar transport proteins signature 2. 124 149 IPR005829 GO:0016020|GO:0022857|GO:0055085
Bisa01g3922 518 PANTHER SOLUTE CARRIER FAMILY 2, FACILITATED GLUCOSE TRANSPORTER 22 489 IPR045262 GO:0015144
Bisa01g3922 518 FunFam probable polyol transporter 4 18 490 - -
Bisa01g3922 518 NCBIfam sugar porter family MFS transporter 15 483 IPR003663 GO:0016020|GO:0022857|GO:0055085
Bisa01g3922 518 PRINTS Sugar transporter signature 119 138 IPR003663 GO:0016020|GO:0022857|GO:0055085
Bisa01g3922 518 PRINTS Sugar transporter signature 36 46 IPR003663 GO:0016020|GO:0022857|GO:0055085
Bisa01g3922 518 PRINTS Sugar transporter signature 294 304 IPR003663 GO:0016020|GO:0022857|GO:0055085
Bisa01g3922 518 PRINTS Sugar transporter signature 411 423 IPR003663 GO:0016020|GO:0022857|GO:0055085
Bisa01g3922 518 PRINTS Sugar transporter signature 388 409 IPR003663 GO:0016020|GO:0022857|GO:0055085
Bisa01g3922 518 MobiDBLite consensus disorder prediction 494 518 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g3922 Bisa-ChrBisa01 94594913 94599578 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g3922 15 513 Organic Solute Cotransporters AT3G18830 72.200 0.0 746
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa01g3922 01 94594913 94599578 Bisa11g1658 11 37804314 37806349 ECH
Bisa01g3922 01 94594913 94599578 Bisa01g3922 01 94594913 94599578 ECH