LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bisa01g2840	ATGAATCGGAAAATGGGTTCTCTCTGTTTTCCTCTGTTTCTGATTCTCTCAGCTTCAGGGTTGTTGCAAGAGGCAGAGTCAAAGACATATTGGGGAGACACAGAGGTTTTGAAGCAACTAAGGAGTAGTCTCAAGGACGGTTCTGTGCGTCCAGGTTCGTGTCTAAGTTCGTGGGATTTCAGTGTCGATCCATGCGACAACCTGTTCGGCGAGAAATTCACGTGCGCCTTCCGATGTGACGTCGTCGAGTCCGGTTCGAGTCGGGTCACCGAGCTCACCCTCGACCAGGCCGGTTACGCCGGTTCGCTCGCCTCATCCACCTGGAACCTTCCGTATTTGGAAACTCTCGACGTCTCGAACAACAACTTTTCCGGTCAGATTCCTGAGTCATTCTCGAACTTGACTCGCCTCCGACGATTCGCTCTCTCGGGAAATCTCTTCGACGGCGAGATTCCCGATTCCATCGGGTCGCTCTCCAATCTCGAAGAGCTCTACCTCGATAACAATAACCTCCAAGGAACAATCCCATCCAGCTTCAATTCGCTTAAGAGCTTGAAGAGGCTCGAAATTCAACACAATAATCTCACCGGTCCGATCCCAAACCTGGGTTCTCTCGAAAACCTTTACTATCTCGACCTCAGCGACAATGCCGTCGCCGGAGAGTTTCCTTCTCCGGCGACGTTACCCACTTCCTTAGTTCAAATCTCAATGAGAAACAACAGCTTAACTGGGAATTTAACATCGGAAAGCTTCAGAGATCTAACGTACTTACAGGTACTGGATTTGAGTTACAACAATCTGGCCGGCTCTGTTCCGACGGTTCTCTTCGAGCTTCCGTCGCTCCAACAATTAACCCTCTCATTCAACAAATTCTCCTCCATCGAAGCTCCATCTTACAGTCTGGGCTCTCAGAGTGGGCTCATAGCCGTTGATTTAAGCAACAACGGGCTTCAAGGGGTGTTACCTTCGTTCATGGGAGTGATGCCGGTGCTTTCGTCTCTGTCGTTGGAGAACAACATGTTCACGGGTTTGATTCCGACGCTGTACGCATTAAAGACGGTTTTTCCTGAAAGTGGTGTGTCTCCGTTTGAGAGGCTTTTGTTGGGTGGGAATTACCTGATCGGAGGCGTGCCGATACCGTTGTTGCAGCTTAAACCGGGTTCTGCGAATGTGAGACTGGGTCAGAATTGCTTGTACAGATGCCCTCTTCGGTTCTTTTTCTGTGACCAACAGAAATCTTTAGATGATTGTAAGAGATTTATCCCCTTCATTCCTTAG	1278	0.493	MNRKMGSLCFPLFLILSASGLLQEAESKTYWGDTEVLKQLRSSLKDGSVRPGSCLSSWDFSVDPCDNLFGEKFTCAFRCDVVESGSSRVTELTLDQAGYAGSLASSTWNLPYLETLDVSNNNFSGQIPESFSNLTRLRRFALSGNLFDGEIPDSIGSLSNLEELYLDNNNLQGTIPSSFNSLKSLKRLEIQHNNLTGPIPNLGSLENLYYLDLSDNAVAGEFPSPATLPTSLVQISMRNNSLTGNLTSESFRDLTYLQVLDLSYNNLAGSVPTVLFELPSLQQLTLSFNKFSSIEAPSYSLGSQSGLIAVDLSNNGLQGVLPSFMGVMPVLSSLSLENNMFTGLIPTLYALKTVFPESGVSPFERLLLGGNYLIGGVPIPLLQLKPGSANVRLGQNCLYRCPLRFFFCDQQKSLDDCKRFIPFIP	425

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bisa01g2840	425	Pfam	Leucine Rich Repeat	113	134	IPR001611	GO:0005515
	Bisa01g2840	425	Gene3D	Ribonuclease Inhibitor	296	418	IPR032675	-
	Bisa01g2840	425	SMART	LRR_typ_2	110	133	IPR003591	-
	Bisa01g2840	425	SMART	LRR_typ_2	158	181	IPR003591	-
	Bisa01g2840	425	SMART	LRR_typ_2	278	301	IPR003591	-
	Bisa01g2840	425	SMART	LRR_typ_2	328	351	IPR003591	-
	Bisa01g2840	425	SMART	LRR_typ_2	254	277	IPR003591	-
	Bisa01g2840	425	SMART	LRR_typ_2	182	205	IPR003591	-
	Bisa01g2840	425	Gene3D	Ribonuclease Inhibitor	32	199	IPR032675	-
	Bisa01g2840	425	FunFam	Nuclear pore complex protein NUP107	31	200	-	-
	Bisa01g2840	425	Gene3D	Ribonuclease Inhibitor	200	295	IPR032675	-
	Bisa01g2840	425	PRINTS	Leucine-rich repeat signature	113	126	-	-
	Bisa01g2840	425	PRINTS	Leucine-rich repeat signature	254	267	-	-
	Bisa01g2840	425	FunFam	LRR receptor-like serine/threonine-protein kinase ERECTA	201	294	-	-
	Bisa01g2840	425	SUPERFAMILY	L domain-like	86	378	-	-
	Bisa01g2840	425	Pfam	Leucine rich repeat	159	217	IPR001611	GO:0005515
	Bisa01g2840	425	Pfam	Leucine rich repeat	232	291	IPR001611	GO:0005515
	Bisa01g2840	425	PANTHER	LEUCINE-RICH REPEAT (LRR) FAMILY PROTEIN	13	417	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bisa01g2840	Bisa-ChrBisa01	57223962	57225239	Dispersed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Bisa01g2840	40	385	Receptor kinase-like Gene Family	AT1G17750	35.967	5.15e-40	150

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Bisa11g1755	11	39129903	39130371	Bisa01g2840	01	57223962	57225239	CCT
	Bisa01g2840	01	57223962	57225239	Bisa01g2840	01	57223962	57225239	ECH
	Bisa01g2840	01	57223962	57225239	Bisa11g1755	11	39129903	39130371	ECH