LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bisa01g2269	ATGAGGCTCTGGCAGAGAGTCGCCGGAGCTTTGAAGGACCGAAGCAGCATCTTGTTGGCTCAGCTCTCTCGCCGTTCCTCTTTCCGCCACCCCGATCTCGAAGCCGCCATTATCAAAGCTACAAGCCACGACGAGCACCGAATCGATTGCAAGAACGTCCAACGCGTCTTCCGATGGGTTCGTACCTCTCCTCTGTGCCTTCGACCCCTCATATGGGCCCTCACCAGGAGGATGGAGAAGACCCGAAGCTGGGCCGTCGCCATCAAGGGCTTGATGCTCATGCACGGCATTTTCTGTTGCGACGTCGCCAATGTTCAAAAGATGGGTCCATTGCCGTTTGATTTGTCGAATTTCAGCGACGGGTATACGAACCCAGAAAGGATTGGGGTTTTCAACGACTTTGTACGTTCGTATTTCGCGTATTTGAACCAGAAATCAGCGTTTATGTGCAAAGAGTATAGGAAACAACACAAGAGGACGAAGACTGAGGAGACGTTGATGGAAGAATTGAAAAGATTGCAGGCGATGCAGGGTCTGATTGATATGCTGCTTGTGATTAAGCCCAACATGAATCTGCAAGTGGGTCTGATTCTTGAGGCCATGGATTGCGTGATTGTGGAACTTTTCGATGTGTATAGCAAGTTCTGCAAAGCGATTGCTCAAGCATTGTTGAAGATGCACGACATTGGTGGGAAGGAGGAAGCTGGCGTTGGGCTTCAGGTTTTGAAGAAAGCAGCGAGACAAAGCGATGATCTGTCTCTGTATTTTGATTTCTGTAGGGAAATCGGTGTCCTCAACGCCGCTCAGTGCCCCAAAATGGAGAAAATCCCAGAAGGGTATATGCAAGATCTTGAAAGACTCATGAATGGTGATTTTGAGATGGAGATCTTGAAGGGGAATGAGGAGGAACAGGACAAGGCCGTTTTCACCAAAGTAGAAGTCAGGGAATCACCGAATGGTTTGAAGACAGTGATCACAGACAAATGGGAGGTCTTTGAAGATGAATTTGTAGTTCTTGATAGACCAAACGCCTTTGGTGGTGGAGCTACAAAACTCGCTTTCTCGACCAATCCTTTTGAAGAACCATGTTCATATACTATCGTTCCTTATCATGCAGCCTATAGTCAAGTGGTTCCGGACTTGATTAGTTTATAG	1155	0.4771	MRLWQRVAGALKDRSSILLAQLSRRSSFRHPDLEAAIIKATSHDEHRIDCKNVQRVFRWVRTSPLCLRPLIWALTRRMEKTRSWAVAIKGLMLMHGIFCCDVANVQKMGPLPFDLSNFSDGYTNPERIGVFNDFVRSYFAYLNQKSAFMCKEYRKQHKRTKTEETLMEELKRLQAMQGLIDMLLVIKPNMNLQVGLILEAMDCVIVELFDVYSKFCKAIAQALLKMHDIGGKEEAGVGLQVLKKAARQSDDLSLYFDFCREIGVLNAAQCPKMEKIPEGYMQDLERLMNGDFEMEILKGNEEEQDKAVFTKVEVRESPNGLKTVITDKWEVFEDEFVVLDRPNAFGGGATKLAFSTNPFEEPCSYTIVPYHAAYSQVVPDLISL	384

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bisa01g2269	384	CDD	ANTH_N_AP180_plant	33	148	-	-
	Bisa01g2269	384	Gene3D	ANTH domain	152	302	IPR014712	GO:0005545\|GO:0030136\|GO:0030276\|GO:0048268
	Bisa01g2269	384	Gene3D	-	5	151	IPR008942	-
	Bisa01g2269	384	FunFam	Putative clathrin assembly protein	7	153	-	-
	Bisa01g2269	384	ProSiteProfiles	ENTH domain profile.	25	156	IPR013809	-
	Bisa01g2269	384	Pfam	ANTH domain	32	288	IPR011417	GO:0005543
	Bisa01g2269	384	SUPERFAMILY	ENTH/VHS domain	32	148	IPR008942	-
	Bisa01g2269	384	PANTHER	CLATHRIN ASSEMBLY PROTEIN	5	302	IPR045192	GO:0048268\|GO:0072583
	Bisa01g2269	384	SUPERFAMILY	GAT-like domain	168	289	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bisa01g2269	Bisa-ChrBisa01	41031404	41032558	Transposed

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Bisa01g2269	01	41031404	41032558	Bisa01g2269	01	41031404	41032558	ECH