Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g2177 ATGGCCATGGCCATGACGCCTGGGAAAGACCCATCATCTCCCGCCTTTCTCGACACCGTCGAAGAGATTACCAAAATCTACAGATCGCTGCCACCTCGGCCTTCCATTGAAGAAGTCGAAGCTGCCACTTCCACAGTCGAAACCGTCAACACCGAGGAGAATATGAAGCTCCAAGAAATCTCAATGCAACAGGTCCCCCCTGGTGTCCCTGAGGAGCTATTCTCGGTGCTCCAAGAATTGAAGAGGACCACAGTCGTGTTCCAGAGCCTTGAGCAGAGGAGGGAGGCTCTCTACCTTCTCCAGCTGGAAAAATTGTTTCAGACCTCTGCTGATCTTATCCAGAGGGCTTCGGAATTGGTTTCTGGAGATGTTCAGAAACCGAGATATCCTAGTTTATCCCAACCGGTTGCAAAAGTGGCGAGAGATGTTGCTGTTATCGGCGATGAAAGTCTGGTGAAGGAAAGGGGAGACGAAGAAACGGAGAAAATTAGCCTTAACGTTGAAAGGGGATCCTCCGCGAAGGCGTCTTTCCTTGCTGTGGATGGAAACTCTGATAAATTAAGTCTTATGAAAGTAGCCACGGTGATTGAAAATTGTGCTAACAGTGGAGCAGCAATCCTTGAGCTAAGAGGGAAGCTGGTGGACCAGATGGAATGGTTGCCTGTATCAATTGGGAAATTGTCTCATGTCACTGAAATGGACCTATCTGAGAACAGAATCATGGCTCTTCCTTCCACTATTGTGGGTCTCAGAGCCTTAACAAAGCTAGATCTTCACTCAAACCAGCTTATAAACCTTCCACACTCCTTCGGGGAACTGATCAACCTCACTGATCTTGACCTCCACGCCAACAGATTAAGATCACTGCCTGCATCTTTTGGAAACTTGGTGAATCTCATTGATCTTGACATAAGTTCAAATGAGTTCACACAATTACCAGATACGATTGAGAATTTAAGTAGCTTGAAGAGATTAAATGTCACAACAAACGAGCTTGAGGAGCTGCCTTATACAATTGGAAATTGCTTATCACTCTCAGAGCTGCAGTTAGATTTCAATCAGCTCAAAGCCCTTCCTGAGGCAATTGGGAAGCTGGAATGCTTAGAGACCTTAACTTTGCACTATAACAGAATCAAGGGGTTGCCTACGACTATGGGTAACCTGTGCAGTTTGAAAGAACTTGATATTAGCTTTAATGAACTGGAATTTGTACCAGAGAACCTGTGTTTTGCTGTGAGTCTGAAGAAATTAAATGTGAGTAACAACTTTGCAGACCTAAGAGCCTTGCCAAGATCCATTGGAAATCTTGAAATGCTTGAGGAGCTGGATATAAGTGATGATCAAATAAGAGCACTACCGGAGTCTTTCAGGCTCTTGTCCAAGTTGAGAGTTTTTCACGCTGATGAGACTCCTCTGGAGGTGCCACCCAGAGAAGTGGTCAAGTTGGGTGCTCAGGAAGTTGTGCAGTACATGGCTGACTTTGTGGCCAAGAGGGATGCGAAATTACTGTCACCAAAGAAGAAGAGGAAGGGGTTTTGGTTCTGGTTCTGCACAGTAATGTGCCCCGTAAGTGGGAGATGA 1581 0.4579 MAMAMTPGKDPSSPAFLDTVEEITKIYRSLPPRPSIEEVEAATSTVETVNTEENMKLQEISMQQVPPGVPEELFSVLQELKRTTVVFQSLEQRREALYLLQLEKLFQTSADLIQRASELVSGDVQKPRYPSLSQPVAKVARDVAVIGDESLVKERGDEETEKISLNVERGSSAKASFLAVDGNSDKLSLMKVATVIENCANSGAAILELRGKLVDQMEWLPVSIGKLSHVTEMDLSENRIMALPSTIVGLRALTKLDLHSNQLINLPHSFGELINLTDLDLHANRLRSLPASFGNLVNLIDLDISSNEFTQLPDTIENLSSLKRLNVTTNELEELPYTIGNCLSLSELQLDFNQLKALPEAIGKLECLETLTLHYNRIKGLPTTMGNLCSLKELDISFNELEFVPENLCFAVSLKKLNVSNNFADLRALPRSIGNLEMLEELDISDDQIRALPESFRLLSKLRVFHADETPLEVPPREVVKLGAQEVVQYMADFVAKRDAKLLSPKKKRKGFWFWFCTVMCPVSGR 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g2177 526 Pfam Leucine rich repeat 225 263 IPR001611 GO:0005515
Bisa01g2177 526 Pfam Leucine rich repeat 344 401 IPR001611 GO:0005515
Bisa01g2177 526 Pfam Leucine rich repeat 275 332 IPR001611 GO:0005515
Bisa01g2177 526 ProSiteProfiles Leucine-rich repeat profile. 275 296 IPR001611 GO:0005515
Bisa01g2177 526 SMART LRR_typ_2 365 387 IPR003591 -
Bisa01g2177 526 SMART LRR_typ_2 436 458 IPR003591 -
Bisa01g2177 526 SMART LRR_typ_2 250 272 IPR003591 -
Bisa01g2177 526 SMART LRR_typ_2 296 318 IPR003591 -
Bisa01g2177 526 SMART LRR_typ_2 319 342 IPR003591 -
Bisa01g2177 526 SMART LRR_typ_2 273 295 IPR003591 -
Bisa01g2177 526 SMART LRR_typ_2 227 249 IPR003591 -
Bisa01g2177 526 SMART LRR_typ_2 388 411 IPR003591 -
Bisa01g2177 526 SMART LRR_typ_2 344 364 IPR003591 -
Bisa01g2177 526 SUPERFAMILY L domain-like 215 471 - -
Bisa01g2177 526 PANTHER LEUCINE-RICH REPEAT SERINE/THREONINE-PROTEIN KINASE 1 223 422 - -
Bisa01g2177 526 FunFam Plant intracellular Ras-group-related LRR protein 4 186 494 - -
Bisa01g2177 526 Gene3D Ribonuclease Inhibitor 179 497 IPR032675 -
Bisa01g2177 526 SMART LRR_bac_2 319 338 - -
Bisa01g2177 526 SMART LRR_bac_2 365 384 - -
Bisa01g2177 526 SMART LRR_bac_2 411 432 - -
Bisa01g2177 526 SMART LRR_bac_2 273 292 - -
Bisa01g2177 526 SMART LRR_bac_2 436 455 - -
Bisa01g2177 526 SMART LRR_bac_2 227 246 - -
Bisa01g2177 526 SMART LRR_bac_2 388 407 - -
Bisa01g2177 526 SMART LRR_bac_2 296 315 - -
Bisa01g2177 526 SMART LRR_bac_2 342 361 - -
Bisa01g2177 526 SMART LRR_bac_2 250 269 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g2177 Bisa-ChrBisa01 38901368 38903574 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g2177 319 473 Receptor kinase-like Gene Family AT3G11080 34.783 7.24e-13 69.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa01g2177 01 38901368 38903574 Bisa01g2177 01 38901368 38903574 ECH