Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g1903 ATGGCAAACCACAGAATTCCCAAACCGAAATGGTTCTCGAACAAAACTCTCAGGCTCAGCGGTCTCAGTCGCTCCAGATCCTCCACCTCCTCCTCCTCAAGCTCTCCCAAATCACCCTCCACTCCCAAACACAGTACCAGAGAGGACGAGCTCCGAGAGGTATTCCGTCGCTTCGACGGCAACGGAGACGGCCAAATCTCGGCCTCCGAACTCAGGTCCTATTTCGGATCAATCGGAGAGTACCTGTCGCACGAAGAGGCGGAGGAAGTGATCAGGGACCTCGATTCGGACGGGGACAGTCTCTTGAGCTTCGAAGATTTCGTGAGGCTGATGGAGAGGGAAGGCGACGAGGAGGAGGATCTGAAGAAGGCGTTCGAGATGTTCGTGTGGGAAAAGGGGTCGGGGTGTATCACGCCGAAGGGGTTGCAGAGGATGCTGCACCGCCTTGGAGATAACAAGTCGTACGATGAGTGTGTCGCCATGATCCACGCCTTTGACGTTGATCGTAACGGCGTGCTTGATTTCAACGAGTTTCACCAGATGATGATGGCTTAA 555 0.5459 MANHRIPKPKWFSNKTLRLSGLSRSRSSTSSSSSSPKSPSTPKHSTREDELREVFRRFDGNGDGQISASELRSYFGSIGEYLSHEEAEEVIRDLDSDGDSLLSFEDFVRLMEREGDEEEDLKKAFEMFVWEKGSGCITPKGLQRMLHRLGDNKSYDECVAMIHAFDVDRNGVLDFNEFHQMMMA 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g1903 184 ProSitePatterns EF-hand calcium-binding domain. 166 178 IPR018247 -
Bisa01g1903 184 CDD EFh 50 111 IPR002048 GO:0005509
Bisa01g1903 184 PANTHER CALCIUM BINDING PROTEIN 45 111 - -
Bisa01g1903 184 ProSitePatterns EF-hand calcium-binding domain. 59 71 IPR018247 -
Bisa01g1903 184 MobiDBLite consensus disorder prediction 16 41 - -
Bisa01g1903 184 SMART efh_1 50 78 IPR002048 GO:0005509
Bisa01g1903 184 SMART efh_1 157 184 IPR002048 GO:0005509
Bisa01g1903 184 SMART efh_1 86 114 IPR002048 GO:0005509
Bisa01g1903 184 ProSiteProfiles EF-hand calcium-binding domain profile. 46 81 IPR002048 GO:0005509
Bisa01g1903 184 Pfam EF-hand domain pair 49 112 IPR002048 GO:0005509
Bisa01g1903 184 ProSiteProfiles EF-hand calcium-binding domain profile. 82 117 IPR002048 GO:0005509
Bisa01g1903 184 Pfam EF-hand domain pair 134 182 IPR002048 GO:0005509
Bisa01g1903 184 ProSiteProfiles EF-hand calcium-binding domain profile. 153 184 IPR002048 GO:0005509
Bisa01g1903 184 FunFam Calmodulin A 38 114 - -
Bisa01g1903 184 Gene3D - 22 114 - -
Bisa01g1903 184 MobiDBLite consensus disorder prediction 1 50 - -
Bisa01g1903 184 Gene3D - 115 184 - -
Bisa01g1903 184 SUPERFAMILY EF-hand 45 183 IPR011992 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g1903 Bisa-ChrBisa01 33207089 33207643 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g1903 10 184 EF-hand Containing Proteins AT3G50770 55.208 5.28e-65 197
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa01g1903 01 33207089 33207643 Bisa01g1903 01 33207089 33207643 ECH