Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g1895 ATGAGCCACAGGAAAAGGCGTAATGGGATTACTGAAACGGAAACAAGAAATGAGATGAAAAAGGGTCATCCAGATTTACCGAGTATCCCCTACCTAATCAACGCACATAGCATAGTGAAGATGAGTTCTGTGAATCTTGGAACATTGGCTCGTCCCAGTTCTGTGTTCAACCAAGCAAGCAGATCCAGATCCCCAACTCTTATCCTCTTCGATGGTCTCAGAAAGTCACCTATTTCCTTCATTACCCCAAGGCCACAATCACAAACCCGTCAAATCTGTTCTGCTTCTTTCTCATCTCTTTCCGTCTCTGCTGTGCTCACCAAGGAAAACACTGTTAGAGATTCCGAGGAAGGAGAAAAACCCACCTTCAATTTCAATGCCTACATGCTTCAAAAGGCTAATTCAGTGAACCAGGCCTTGGAGGCAGCCGTTGCTCTGCGAGAGCCCCTGAAGATCCACGAGGCCATGCGGTACTCCCTCCTCGCCGGCGGAAAGCGCGTGCGCCCGATGCTCTGCATCGCCGCGTGCGAGCTCGTCGGGGGCCACGAATCAATGGCTATGCCGTCCGCATGCGCCGTCGAGATGATTCACACCATGTCGCTGATTCACGATGATTTGCCCTGTATGGATAACGACGATCTCCGGCGAGGTAAACCGACAAACCACAAGGTCTTCGGCGAGGATGTCGCGGTTCTTGCCGGCGATGCTCTTCTGTCTTTCGCTTTCGAGCACGTAGCTGTTTCCACCGTGGGATTGCCGCCGGGGAGGGTAGTTCGCGCTGTCGGGGAGTTAGCAAAGTCGATTGGGGCCGAAGGGCTCGTCGCGGGGCAAGTTGTGGATATCGATTCGGAAGGATTGTCCGATGTGGGGTTGGAGAGACTCGAATTCATTCATCTTCACAAGACGGCGGCGTTGCTGGAGGCGGCGGTTGTGCTGGGAGCAATCGTGGGAGGTGGGTCGGACGAGGAGGTTGAGAGTTTGAGGAAGTTCGCTAGGTACATCGGATTGCTGTTTCAGGTTGTGGACGATATTCTCGATGTTACAAAATCTTCGCAGGAATTGGGGAAAACAGCAGGGAAGGACTTGGTCGCTGATAAGGTGACATATCCGAAACTTTTGGGGATAGAGAAATCGACGGAATTTGCTGAGAAATTGAACAAGGATGCGATAGACCAGCTCTCTGGGTTTGATCCGGAGAAAGCTGCTCCATTAATTGCTTTAGCCGATTACATTGCATACAGGCAGAACTAG 1251 0.5164 MSHRKRRNGITETETRNEMKKGHPDLPSIPYLINAHSIVKMSSVNLGTLARPSSVFNQASRSRSPTLILFDGLRKSPISFITPRPQSQTRQICSASFSSLSVSAVLTKENTVRDSEEGEKPTFNFNAYMLQKANSVNQALEAAVALREPLKIHEAMRYSLLAGGKRVRPMLCIAACELVGGHESMAMPSACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLSFAFEHVAVSTVGLPPGRVVRAVGELAKSIGAEGLVAGQVVDIDSEGLSDVGLERLEFIHLHKTAALLEAAVVLGAIVGGGSDEEVESLRKFARYIGLLFQVVDDILDVTKSSQELGKTAGKDLVADKVTYPKLLGIEKSTEFAEKLNKDAIDQLSGFDPEKAAPLIALADYIAYRQN 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g1895 416 ProSitePatterns Polyprenyl synthases signature 2. 334 346 IPR033749 -
Bisa01g1895 416 CDD Trans_IPPS_HT 152 414 IPR000092 GO:0008299
Bisa01g1895 416 ProSitePatterns Polyprenyl synthases signature 1. 201 217 IPR033749 -
Bisa01g1895 416 PANTHER FARNESYL DIPHOSPHATE SYNTHASE 91 416 - -
Bisa01g1895 416 SFLD Isoprenoid Synthase Type I 127 414 - -
Bisa01g1895 416 MobiDBLite consensus disorder prediction 1 23 - -
Bisa01g1895 416 SFLD Polyprenyl Transferase Like 127 414 - -
Bisa01g1895 416 MobiDBLite consensus disorder prediction 1 25 - -
Bisa01g1895 416 SUPERFAMILY Terpenoid synthases 126 398 IPR008949 -
Bisa01g1895 416 FunFam Geranylgeranyl diphosphate synthase 122 416 - -
Bisa01g1895 416 Gene3D Farnesyl Diphosphate Synthase 122 416 IPR008949 -
Bisa01g1895 416 Pfam Polyprenyl synthetase 152 386 IPR000092 GO:0008299
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g1895 Bisa-ChrBisa01 33056112 33057664 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa11g1630 11 37173246 37174364 Bisa01g1895 01 33056112 33057664 CCT
Bisa01g1895 01 33056112 33057664 Bisa01g1895 01 33056112 33057664 ECH
Bisa01g1895 01 33056112 33057664 Bisa11g1630 11 37173246 37174364 ECH