Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g1838 ATGTTCAGATCAGTAAGTACAAAGATGGGGCCTAGGAGGTATGAGAGATTAGATGAAGATGCTTCTTCTGGTGAAGGTGGGTTTATGAAGGAAGAGTTGAAGAGGAGCACAAGTCTGCCTCCAGGAAGAGAAATGGCTTCGCCTTCAACCTCAACCTATGTCACCACTCTGCAGAGGAATCCCACAAAGAAGGTGAGTAAGGAGAAGAGTCACCCAATCTTCCGCTTCTTGGATTTTCGTCGCAAGAAGAAAACAACAGCGACGCCTGAATTGGTAAGGTATCTTGAGTATGTGAAGGAAGGAGGCATGTGGGATTCGGAATCTAATAAGCCTAATGATCTGCTGAAGACACAAAATAGTTCGGATAAAATTAGAAGCAGAGGGAAAGAGCCAACTTCAACTGTGGACTGTGGAGCTCCGACTATGGAGCTTGTAGCTTCACACATATCAGCAACTCTTCCCAGAGAAAAATTTTCGGTTCACACTGTATTTCATCACACTCTATTTCCTGGGTTCATAACCAGAACTCCGTTCCATCAAATCCCACTTGAATTTTCGTCCAAATTTATTAGTTGTATGAATAGGAACCGTCGCTTTGAAGTATTTGCACTTAAGAAAGAGCATCTTTGGGTTAGCGAACAAGTGTACAGCGGACAAACAGAAGGAGAAGAAGAACCGCATACGAGTTCCTCTTTGGAGGATGACTCGTCTTTCTTGTCTCTTAGTGAGAAACCCGATAGGAATATGGCTTTGCTGGACGATTATGAAGCGGAGGAGCTTCATTATGATTCCCATACTGACCACCGAAGCGGATTTGTGGCTTTACTTGGCAAGCCAAATGTTGGGAAGAGTACACTAGCGAACCAAATGATTGGCCAAAAGTTGTCAATAGTTACACAGAAACCTCAAACAACAAGACACCGAATTCTTGGTATATGTTCTGGCTCAGATTATCAGATAATACTTTATGATACACCTGGTGTTCTCAAGAAGGAAATGCACAAGTTGGACTCGATGATGATGAAGAATGTTCGCAGTGCTGCAGTTAATGCTGACTGTGTATTAATTCTTGTTGATGCTTGTAAAGTGCCTGAAAAGATTGATGAAGTGTTGGAAGAAGGTGTAGGAGACCTCAAAGATAAGCCTCCCACTCTACTGGTTCTGAATAAGAAGGATCTCATCAAACCTGGTGAAATTGCAAAGAACCTCGAGTGGTATCAGAAATTCACTGATGTTGATGAGGTTATACCAGTTAGTGCCAAATATGGCCATGGGGTTGAAGATGTCAAGGACTGGATACTGTCAAAGCTTCCCCAAGGACCAGCCTATTATCCAAAGGACATTGTCAGTGAGCACCCAGAAAGATTTTTTGTGGGTGAAATTGTCAGAGAAAAAATCCTTATGCAGTATCGAAATGAAATTCCCTATGCATGTCAGGTGAATGTTGTAAGCTACAAGGCTCGGCCCAATGCAAAAGATTTCATACAAGTGGAGATTGTTGTTGAGAAAAACTCACAGAAGATTATACTTATTGGAAGAGAAGGAAAGGCTTTGAAACTTCTTGCAACAGCTGCTCGTCTTGACATCGAAGATTTTCTACAAAAGAAAGTTTATCTTGAGATTGAAGTGAAGGTGAAAGAAAATTGGCGGCAAGACGAAGGCCTTCTAAAGTACTACGGCTATGGGGGTCAGATACAAGCTTTATAA 1707 0.4206 MFRSVSTKMGPRRYERLDEDASSGEGGFMKEELKRSTSLPPGREMASPSTSTYVTTLQRNPTKKVSKEKSHPIFRFLDFRRKKKTTATPELVRYLEYVKEGGMWDSESNKPNDLLKTQNSSDKIRSRGKEPTSTVDCGAPTMELVASHISATLPREKFSVHTVFHHTLFPGFITRTPFHQIPLEFSSKFISCMNRNRRFEVFALKKEHLWVSEQVYSGQTEGEEEPHTSSSLEDDSSFLSLSEKPDRNMALLDDYEAEELHYDSHTDHRSGFVALLGKPNVGKSTLANQMIGQKLSIVTQKPQTTRHRILGICSGSDYQIILYDTPGVLKKEMHKLDSMMMKNVRSAAVNADCVLILVDACKVPEKIDEVLEEGVGDLKDKPPTLLVLNKKDLIKPGEIAKNLEWYQKFTDVDEVIPVSAKYGHGVEDVKDWILSKLPQGPAYYPKDIVSEHPERFFVGEIVREKILMQYRNEIPYACQVNVVSYKARPNAKDFIQVEIVVEKNSQKIILIGREGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKYYGYGGQIQAL 568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g1838 568 Hamap GTPase Era [era]. 268 561 IPR005662 GO:0003723|GO:0005525
Bisa01g1838 568 Pfam KH domain 473 550 IPR004044 GO:0003723
Bisa01g1838 568 SUPERFAMILY Prokaryotic type KH domain (KH-domain type II) 446 561 IPR009019 GO:0003723
Bisa01g1838 568 MobiDBLite consensus disorder prediction 1 68 - -
Bisa01g1838 568 ProSiteProfiles Era-type guanine nucleotide-binding (G) domain profile. 269 439 IPR030388 GO:0005525
Bisa01g1838 568 CDD KH-II_Era 460 545 - -
Bisa01g1838 568 CDD Era 268 437 IPR030388 GO:0005525
Bisa01g1838 568 PANTHER GTPASE ERA 215 553 IPR005662 GO:0003723|GO:0005525
Bisa01g1838 568 FunFam GTPase Era 266 449 - -
Bisa01g1838 568 FunFam GTPase Era 450 564 - -
Bisa01g1838 568 NCBIfam small GTP-binding protein domain 272 431 IPR005225 GO:0005525
Bisa01g1838 568 Pfam 50S ribosome-binding GTPase 273 390 IPR006073 GO:0005525
Bisa01g1838 568 ProSiteProfiles Type-2 KH domain profile. 470 547 IPR004044 GO:0003723
Bisa01g1838 568 MobiDBLite consensus disorder prediction 42 61 - -
Bisa01g1838 568 Gene3D - 451 565 IPR015946 -
Bisa01g1838 568 NCBIfam GTPase Era 271 544 IPR005662 GO:0003723|GO:0005525
Bisa01g1838 568 Gene3D - 265 450 IPR027417 -
Bisa01g1838 568 MobiDBLite consensus disorder prediction 106 134 - -
Bisa01g1838 568 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 273 470 IPR027417 -
Bisa01g1838 568 MobiDBLite consensus disorder prediction 216 238 - -
Bisa01g1838 568 MobiDBLite consensus disorder prediction 9 38 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g1838 Bisa-ChrBisa01 32035826 32051036 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa01g1838 01 32035826 32051036 Bisa01g1838 01 32035826 32051036 ECH