Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g1828 ATGTTATTTTCAACCGGAGACATGCCTTCCCCTTCCTCTATATTCTCGGCTTATGCCTCCATGACTACCTCTATCATACTTTTTCGTTCAATGGCTAACGATCTCTTACCTCAGCCAATTCGAGGCTACCTCTGTAACGCCTTCCGTTACTTCATCAAGCCCCGTTCCCCTTCCCTCACCTTAATCATCGAAGAATCTAGCGGCATGACTCGCAACCAAGTCTTCGACGCTGCAGAGGTTTATTTGTCCACCAGAGTCAGCCCCCGGAACGAAAAGCTCAAGATCAGTAAGAGTCCAAAGGAAAAGAATCTGACCATTCGACTGGAAAAGGGTGAGAAGCTTGTGGATTCCTATGACGGGGCTGAGCTCATATGGAGATTTATCTGCGCAGAGTCGGAGAAGAACAACCCTAATGATAACAGTAATATCTCTATAAGATCGGAGAAGCGATATTTTGAGCTGAGTTTTCACAAGAAGCACAAGGATATGGTATTGGGGTCGTATTTGAAGTTCGTTCTTGAAAAGGCCAAGGAGATGAAAGACGAGGAAAGGGTGTTGAAGATGCACACTCTCAACACTTCCTATTGTTACAGTTCGGTGAAATGGGATTCCATCAATTTGGAACACCCATCCAATTTTGAGACTCTGGCTTTGGAGCCAGAGGTGAAGCAGGCCCTGATAGAGGACTTGAACAGGTTCGTGAGGAGGAAGGAGTTCTACAAAAGAGTTGGGAGGGCATGGAAACGTGGGTACTTGTTGTATGGTCCTCCTGGCACTGGGAAATCCAGCTTGATCGCAGCCATGGCTAATTACTTGAAGTTCGATATCTACGACCTCCAACTTGCCAACATAGTCAGAGACTCTGACCTCAGAAAGCTGCTTCTCGCAACCGCTAACAGGTCCATCTTAGTCATTGAAGACATTGATTGTAGCGTTGATCTGCCGGAGCGTCACCGTGGAGATGGACGTAAGCAAGCTGACGTACAGCTGACGTTGTCTGGATTACTTAACTTCATAGATGGACTATGGTCAAGTTGCGGAGACGAGAGGATCATCGTTTTCACCACCAACCACAAGGAAAGGCTAGACCCAGCTCTGTTACGACCTGGGAGAATGGACATGCATATTCACATGTCGTATTGCTCCTACCATGGGTTCAAGATTTTAGCCTCGAATTACTTGGGAATTTCCTCTGATCATCAACTGTTTGGAGAGATAGAAGGACTAATAGAGGAGACACAGATAACCCCCGCGCAAGTGGCAGAGGAGTTGATGAAGAGCGAGGATGCTGACGCTGCACTTGAAGGATTCGTGAATCAGCTCAAGCGCAAGAAGATGGAAGGCGATGTCAGATCTGATGTTTCAGAGGAAGCAGAACATCGTCAACCAAAAAGGAAAGTGAGTTGTAGAACCAAAAGATCTGTGGGGATCGTCAACAGAAATGGTACCCCTCAAAGAAGGACAAGAAGAGGAAGAAGCTTGTGGGCATGA 1491 0.4675 MLFSTGDMPSPSSIFSAYASMTTSIILFRSMANDLLPQPIRGYLCNAFRYFIKPRSPSLTLIIEESSGMTRNQVFDAAEVYLSTRVSPRNEKLKISKSPKEKNLTIRLEKGEKLVDSYDGAELIWRFICAESEKNNPNDNSNISIRSEKRYFELSFHKKHKDMVLGSYLKFVLEKAKEMKDEERVLKMHTLNTSYCYSSVKWDSINLEHPSNFETLALEPEVKQALIEDLNRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLIAAMANYLKFDIYDLQLANIVRDSDLRKLLLATANRSILVIEDIDCSVDLPERHRGDGRKQADVQLTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPGRMDMHIHMSYCSYHGFKILASNYLGISSDHQLFGEIEGLIEETQITPAQVAEELMKSEDADAALEGFVNQLKRKKMEGDVRSDVSEEAEHRQPKRKVSCRTKRSVGIVNRNGTPQRRTRRGRSLWA 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g1828 496 ProSitePatterns AAA-protein family signature. 350 368 IPR003960 GO:0005524|GO:0016887
Bisa01g1828 496 Gene3D - 200 376 IPR027417 -
Bisa01g1828 496 Gene3D - 377 448 - -
Bisa01g1828 496 PANTHER BCS1 AAA-TYPE ATPASE 16 446 - -
Bisa01g1828 496 SMART AAA_5 247 382 IPR003593 GO:0016887
Bisa01g1828 496 Pfam Domain associated at C-terminal with AAA 36 128 IPR025753 -
Bisa01g1828 496 MobiDBLite consensus disorder prediction 448 464 - -
Bisa01g1828 496 MobiDBLite consensus disorder prediction 448 496 - -
Bisa01g1828 496 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 116 429 IPR027417 -
Bisa01g1828 496 CDD RecA-like_BCS1 226 378 - -
Bisa01g1828 496 Pfam ATPase family associated with various cellular activities (AAA) 252 379 IPR003959 GO:0005524|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g1828 Bisa-ChrBisa01 31760909 31763232 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g1828 240 460 Miscellaneous Gene Families AT3G02450 30.303 1.00e-11 65.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa01g1828 01 31760909 31763232 Bisa01g1828 01 31760909 31763232 ECH