Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g1604 ATGGCACTCTGCCAACAAAAGCTTCTATTTTCAGCCCTGTTACTCTTCTGCCTAGCCTTTGGGGTTTCCTCTCACAACAAGCGTTACACACCTCCAAGTGTCACGCCTTTGACTGCTTCTTTCCCTCGTGTTCCATTTGATCGTGGGTTTTCTAAGTCCTTTGGGGCCTCAAATATCCAGTTTCTCAGAAATGGTTCCATCGCCACTCTGGCTCTTGATAAAACCTCAGGCTCTGGTTTGGTTTCGCAAGGCAGATTCTACTATGGATTCTTCAGTGCTGCCATCAAGTTACCTGCTGGTCTTACCTCTGGTGTTGTGGTAGCCTTCTATTTGTCTAATGCAGATAAGTTTCCTCACAACCATGATGAGATAGACATTGAACTTCTTGGGCATGACCAGAGAAACGATTGGGTTATTCAGACGAATGTGTATGCTAATGGAAGTGTGAGCACTGGAAGAGAAGAGAAGTTCTATCTCTGGTTTGATCCAACACAGCAGTATCATTACTACAGCATCTTGTGGAACAACTATCACACAGTGTTTCTAGTGGACAATATTCCAGTGAGGGAGTTCATCCACAACACAGCATATTCAATATACCCATCAAAACCGATGTCAGTGTATGCCACAATATGGGACGGATCAGAATGGGCCACACATGGAGGAAAATACCCTGTGAACTATAAGTATGCTCCATTCGTTGTTTCATTCTCAGAAATGGAGCTAAGTGGCTGTATAACAACATCAAGTCCCTCACTGTCTTCGTGTTCAAAGGCCAATGGTCCTTCTTCAAGCTTAGACCCAGTGAACGGACCAGAGTTCACGAAGCTGTCACAGCAACAGGTGACAGCCATGGATTGGGCCAGAAGGAAGCTCATGTTTTACTCTTACTGTAATGACAAACCCAGGTTCAGAGTCATGCCTCCAGAATGCCGCTAG 939 0.4515 MALCQQKLLFSALLLFCLAFGVSSHNKRYTPPSVTPLTASFPRVPFDRGFSKSFGASNIQFLRNGSIATLALDKTSGSGLVSQGRFYYGFFSAAIKLPAGLTSGVVVAFYLSNADKFPHNHDEIDIELLGHDQRNDWVIQTNVYANGSVSTGREEKFYLWFDPTQQYHYYSILWNNYHTVFLVDNIPVREFIHNTAYSIYPSKPMSVYATIWDGSEWATHGGKYPVNYKYAPFVVSFSEMELSGCITTSSPSLSSCSKANGPSSSLDPVNGPEFTKLSQQQVTAMDWARRKLMFYSYCNDKPRFRVMPPECR 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g1604 312 Gene3D - 28 311 - -
Bisa01g1604 312 PANTHER XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 8-RELATED 40 311 IPR044791 GO:0004553
Bisa01g1604 312 SUPERFAMILY Concanavalin A-like lectins/glucanases 47 311 IPR013320 -
Bisa01g1604 312 Pfam Glycosyl hydrolases family 16 50 229 IPR000757 GO:0004553|GO:0005975
Bisa01g1604 312 Pfam Xyloglucan endo-transglycosylase (XET) C-terminus 275 311 IPR010713 GO:0005618|GO:0016762|GO:0044042|GO:0048046
Bisa01g1604 312 ProSiteProfiles Glycosyl hydrolases family 16 (GH16) domain profile. 24 237 IPR000757 GO:0004553|GO:0005975
Bisa01g1604 312 CDD GH16_XET 44 311 IPR016455 GO:0010411|GO:0016762|GO:0042546
Bisa01g1604 312 PIRSF EndGlu_transf 8 312 IPR016455 GO:0010411|GO:0016762|GO:0042546
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g1604 Bisa-ChrBisa01 27440838 27443066 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g1604 7 311 Glycoside Hydrolase AT1G10550 63.226 1.53e-148 418
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa01g1604 01 27440838 27443066 Bisa01g1604 01 27440838 27443066 ECH