Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g1583 ATGGCAGAGAAGGACCTTGACACCGTGAGAAGAAGGGTGGCCTCCGTAGCCAACCACCTCGTTCCCTTTCACTTGTCACAAAATGGGGCAGTGGAATTGTGTAATACTTCCATGAAAGATAGCTACCACAGGGTTCACGGTGAAGTTTCCTCTCATGAGGTGGTTTGGAGGATAGCTTCTGATGGCTCCGGCGAGGAATTTACCGACATTATTTATGAGAAGGCAGAAGGAGAAGCCATAGCAAAGATAACTATTAATAGGCCGGAGAAAAGGAATGCTTTCCGGCCTCGTACCATCAAGGAGCTAATTCGTGCTTTTGATGATTCCAGGGATGATAGCTCTGTGGGTGTCATCATTCTCACTGGGAAGGGAACCAAGGCATTCTGTAGTGGTGGTGACCAGGATTTGAGAACAAAAGATGGTTATGCTGATTTTGAAAATATTGGCCGCCTTAATGTATTAGACTTACAGGTGCAGATTCGTCGTCTTCCAAAACCAGTAATTGCTATGGTAGCAGGTTATGCTGTTGGAGGAGGACATGTACTACACATGGTGTGTGATCTAACCATAGCAGCAGATAATGCTGTATTTGGCCAAACCGGTCCTAAGGTTGGAAGCTTTGATGCTGGTTATGGAAGTTCCATCATGTCACGTTTGGTCGGGCCCAAAAAAGCACGTGAAATGTGGTTCCTCACAAGGTTCTACACTGCCGTTGAAGCTGACAAAATGGGACTTGTCAATACTGTTGTACCTCTAGAGAATTTAGAGAAAGAAACAGTAAAATGGTGTCGGGAGATACTGAGGAACAGCCCAACAGCACTTCGAGTTCTCAAGTCTGCCCTTAATGCAGTGGATGATGGCCATGCTGGACTTCAGGAACTTGCTGGAAACGCAACACTCATATTTTATGGCACTGAGGAAGCTAGTGAGGGAAGGACAGCATTTATGCAACGTAGAGCCCCGGATTTTTCTGAGTTTCGTAGGCGACCTTAA 993 0.4602 MAEKDLDTVRRRVASVANHLVPFHLSQNGAVELCNTSMKDSYHRVHGEVSSHEVVWRIASDGSGEEFTDIIYEKAEGEAIAKITINRPEKRNAFRPRTIKELIRAFDDSRDDSSVGVIILTGKGTKAFCSGGDQDLRTKDGYADFENIGRLNVLDLQVQIRRLPKPVIAMVAGYAVGGGHVLHMVCDLTIAADNAVFGQTGPKVGSFDAGYGSSIMSRLVGPKKAREMWFLTRFYTAVEADKMGLVNTVVPLENLEKETVKWCREILRNSPTALRVLKSALNAVDDGHAGLQELAGNATLIFYGTEEASEGRTAFMQRRAPDFSEFRRRP 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g1583 330 ProSitePatterns Enoyl-CoA hydratase/isomerase signature. 168 188 IPR018376 GO:0003824
Bisa01g1583 330 PANTHER NUCLEOSIDE-DIPHOSPHATE-SUGAR EPIMERASE 2 330 - -
Bisa01g1583 330 Gene3D - 268 318 IPR014748 -
Bisa01g1583 330 Pfam Enoyl-CoA hydratase/isomerase 77 325 IPR001753 -
Bisa01g1583 330 CDD crotonase-like 70 266 - -
Bisa01g1583 330 Gene3D - 60 267 - -
Bisa01g1583 330 Hamap 1,4-dihydroxy-2-naphthoyl-CoA synthase [menB]. 56 329 IPR010198 GO:0008935|GO:0009234
Bisa01g1583 330 FunFam 1,4-dihydroxy-2-naphthoyl-CoA synthase 49 267 - -
Bisa01g1583 330 NCBIfam 1,4-dihydroxy-2-naphthoyl-CoA synthase 67 326 IPR010198 GO:0008935|GO:0009234
Bisa01g1583 330 FunFam 1,4-dihydroxy-2-naphthoyl-CoA synthase 268 318 - -
Bisa01g1583 330 SUPERFAMILY ClpP/crotonase 66 325 IPR029045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g1583 Bisa-ChrBisa01 27034971 27038296 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g1583 5 330 Acyl Lipid Metabolism Gene Families AT1G60550 77.711 0.0 541
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa01g1583 01 27034971 27038296 Bisa01g1583 01 27034971 27038296 ECH