Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g1131 ATGTCTTCAAAAGCTACAGCCTTGATGTTCATCTTCATGATTTTCACGTTGAATGCGATGCCACCAACATACGCATGTGGTCATTGCACGCCGCCACATCCACCGTACCACCGGCCGGGTCACCCGAAAACCCCCAAACCCCCGAAAGTGTCACCGGCGCCTCCACTTCCACCTGTCATTGTAACACCGCCGGCCCCTCCGATGCCACCTGTCATTGTGACACCGCCGGCGCCGATCATTGTGACACCTCCGCCGCTACCCCCTCCTTCGGTTATATATCCTCCGCCCACTGTACCTTCACCACCGTACTGGGGTGTTCCTCCTCGAGTGACTTGTCCTATCGATGCCTTAAATCTAGGGCTGTGTTTGGATGTCCTTCAAGGGCTAGTCCATGTGGGAATAGGAAACCCAATTGAGAATATATGCTGTCCCGTGATCCAAGGGTTGCTTGAGCTGGAAGCAGCTATTTGTCTCTGCACTGTTATAAGGCTTAAGCTTCTCAACCTCAACATATTCGTTCCTCTTGCTCTTCAGGTCCTTGCAACTTGCGGGTTGACTCCTCCTCCTGGTTTTGTTTGCCCACCTCTTTAA 591 0.5262 MSSKATALMFIFMIFTLNAMPPTYACGHCTPPHPPYHRPGHPKTPKPPKVSPAPPLPPVIVTPPAPPMPPVIVTPPAPIIVTPPPLPPPSVIYPPPTVPSPPYWGVPPRVTCPIDALNLGLCLDVLQGLVHVGIGNPIENICCPVIQGLLELEAAICLCTVIRLKLLNLNIFVPLALQVLATCGLTPPPGFVCPPL 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g1131 196 SMART aai_6 112 193 IPR016140 -
Bisa01g1131 196 Gene3D - 106 195 IPR036312 -
Bisa01g1131 196 Pfam Hydrophobic seed protein 111 194 IPR027923 -
Bisa01g1131 196 CDD HPS_like 111 193 IPR027923 -
Bisa01g1131 196 PRINTS Proline rich extensin signature 34 50 - -
Bisa01g1131 196 PRINTS Proline rich extensin signature 95 111 - -
Bisa01g1131 196 PRINTS Proline rich extensin signature 20 32 - -
Bisa01g1131 196 PRINTS Proline rich extensin signature 67 88 - -
Bisa01g1131 196 PRINTS Proline rich extensin signature 55 67 - -
Bisa01g1131 196 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 114 195 IPR036312 -
Bisa01g1131 196 PANTHER - 5 193 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g1131 Bisa-ChrBisa01 18880932 18881522 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g1131 111 195 Acyl Lipid Metabolism Gene Families AT4G22490 36.471 3.80e-08 48.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa01g1131 01 18880932 18881522 Bisa01g1131 01 18880932 18881522 ECH