Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g0828 ATGGCTCAGGTGGTGGCCACGCGTTCCATTCACACCTCCTTCTTGTGCTCCAACACTGGATCTGCACAACACAGAGCCGAAAAGTTGTTAAAGCCTTCGACTTTCGCTTCCAAGGTGTTCGCACCTCAAGTGACTAACAGCTCCAAGGTTGGATTCAGAAGAAGCTGCCAGATCACTGCGAGGAAATCTGCACCCGTACCTGCTGAAGTCGTTCCCGTATCACCACCGGATGATGTAAAGATTGAGGAGCAGTTGCAGCATTTGCGTGGAATCCAGCAATTCGGTGACACATCAGTTGGCATGTGGTCGAAGCCCACGTTTAGACGCAAGACGAAGATAGTTTGTACGGTTGGTCCTTCTACCAATACTCGGGAAATGATTTGGAAGCTGGCTGAGGCTGGGATGAATGTTGCTCGCCTCAATATGTCTCATGGAGACCATGCTTCTCATCAGAAAGTTATTGACTTGGTTAAAGAATATAATGCACAGTCAAAGGACAATGTGATCTCGATTATGCTTGACACCAAGGGTCCTGAGGTTAGGAGTGGGGATTTGCCACAACCAATCATGCTAACAAGTGGTCAGGAATTCACTTTTACGATTCAGAGAGGTGTTGGAACTGCAGATTGTGTTAGTGTGAACTACGATGATTTTGTCAATGATGTGGAAGTTGGGGACATGCTTCTTGTTGATGGTGGTATGATGTCTTTGACGGTTAAATCAAAGACAGCAGATTCAGTGAAATGTGAAGTTGTTGATGGAGGAGAGCTCAAATCAAGGCGGCATTTGAATGTTAGAGGAAAGAGTGCAACACTGCCTTCCATTACTGAAAAGGACTGGGATGACATCAAATTTGGAGTGGATAACCAAGTTGACTTCTATGCTGTTTCCTTTGTTAAGGATGCACAAGTGGTTCATGAACTGAAGAATTATTTAAAAAGCTGTGGTGCTGATATACATGTCATTGTGAAGATTGAAAGTGCAGACTCTATACCAAACTTGCATTCAATTATCACAGCTTCTGATGGGGCAATGGTTGCAAGAGGAGATCTTGGTGCAGAGCTCCCTATCGAGGAAGTTCCCCTTTTGCAGGAAGAGATAATTAATATTTGTCGTAGCATGGGGAAAGCTGTTATTGTAGCAACTAATATGCTGGAAAGCATGATTGTTCACCCCACACCAACCAGAGCGGAGGTATCAGATATTGCAATTGCAGTTCGAGAAGGTGCTGATGCAATCATGCTTTCTGGAGAAACTGCTCATGGAAAGTTCCCACTGAAAGCTGTGAAAGTCATGCACACAGTAGCGTTACGGACAGAAGCAACCATTCTAGGTGGTCAAATGCCACCTAATCTTGGTCAAGTATTCAAGAACCACATGAGCGAGATGTTTGCATACCATGCCACAATGATGTCTAACACCCTTGGAACCTCAACTGTGGTCTTCACTAGATCAGGTTTCATGGGTATCCTTCTGAGCCACTATCGACCTTCTGGCACCATTTTTGCATTTACAGATGAGAAGAGGATACAACAGAGGCTGGCTTTGTATCAGGGAGTGTGTCCTATATACATGGAATTCTCTGATGATGCGGAAGAGACTTTCACAAAAGCCTTGGGTTTGCTGCAGAAGCAAGGAATGGTGAAGGAAGGAGAAGAGGTGGCCATTGTACAGAGTGGCAGACAACCCATATGGAGGTTCCAATCCACTCACAACATCCAGGTCCGAAAAGTGTAA 1737 0.4502 MAQVVATRSIHTSFLCSNTGSAQHRAEKLLKPSTFASKVFAPQVTNSSKVGFRRSCQITARKSAPVPAEVVPVSPPDDVKIEEQLQHLRGIQQFGDTSVGMWSKPTFRRKTKIVCTVGPSTNTREMIWKLAEAGMNVARLNMSHGDHASHQKVIDLVKEYNAQSKDNVISIMLDTKGPEVRSGDLPQPIMLTSGQEFTFTIQRGVGTADCVSVNYDDFVNDVEVGDMLLVDGGMMSLTVKSKTADSVKCEVVDGGELKSRRHLNVRGKSATLPSITEKDWDDIKFGVDNQVDFYAVSFVKDAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITASDGAMVARGDLGAELPIEEVPLLQEEIINICRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAIMLSGETAHGKFPLKAVKVMHTVALRTEATILGGQMPPNLGQVFKNHMSEMFAYHATMMSNTLGTSTVVFTRSGFMGILLSHYRPSGTIFAFTDEKRIQQRLALYQGVCPIYMEFSDDAEETFTKALGLLQKQGMVKEGEEVAIVQSGRQPIWRFQSTHNIQVRKV 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g0828 578 PRINTS Pyruvate kinase family signature 167 183 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Bisa01g0828 578 PRINTS Pyruvate kinase family signature 291 305 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Bisa01g0828 578 PRINTS Pyruvate kinase family signature 348 372 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Bisa01g0828 578 PRINTS Pyruvate kinase family signature 373 397 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Bisa01g0828 578 PRINTS Pyruvate kinase family signature 398 416 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Bisa01g0828 578 PRINTS Pyruvate kinase family signature 321 347 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Bisa01g0828 578 PRINTS Pyruvate kinase family signature 417 433 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Bisa01g0828 578 FunFam Pyruvate kinase 274 439 - -
Bisa01g0828 578 SUPERFAMILY PK C-terminal domain-like 427 578 IPR036918 -
Bisa01g0828 578 SUPERFAMILY PK beta-barrel domain-like 178 269 IPR011037 -
Bisa01g0828 578 SUPERFAMILY Phosphoenolpyruvate/pyruvate domain 101 443 IPR015813 GO:0003824
Bisa01g0828 578 PANTHER PYRUVATE KINASE 85 556 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Bisa01g0828 578 FunFam Pyruvate kinase 440 559 - -
Bisa01g0828 578 Gene3D - 451 578 IPR036918 -
Bisa01g0828 578 NCBIfam pyruvate kinase 109 577 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Bisa01g0828 578 Gene3D - 111 436 IPR040442 -
Bisa01g0828 578 FunFam Pyruvate kinase 179 272 - -
Bisa01g0828 578 Gene3D - 179 272 IPR015806 GO:0004743|GO:0006096
Bisa01g0828 578 Pfam Pyruvate kinase, alpha/beta domain 466 558 IPR015795 -
Bisa01g0828 578 Pfam Pyruvate kinase, barrel domain 109 443 IPR015793 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Bisa01g0828 578 ProSitePatterns Pyruvate kinase active site signature. 319 331 IPR018209 GO:0004743|GO:0006096
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g0828 Bisa-ChrBisa01 13385514 13391046 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa01g0828 01 13385514 13391046 Bisa01g0828 01 13385514 13391046 ECH