Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g0627 ATGAGTTTCGCAGCTTATAAGATGATGCACTGCCCAACGGGCATCGAGAATTGCGCTTCTGGGTTCATCACACATTCTCGTGCCGACTTGGTTCCCCGAATCCCTCCTATTCAGACCGATGACCTTGACTCGGAGTGGCCGGCGAGGCGCGAGATTGGCCCCATTCCGAACGTCATTATCACCGCGGCGAATGTTTTGGAAGTATACATTGTGAGGGTGCAAGAAGAAGGTAGTCGAGAGTCTAAGGGTCACGTAGAATCCAAGCGTGGTGCTCTCATGGATGGTCTTACTGGGGCCTCTCTCGAGCTTGCTTGTCATTACAGGTTGCATGGTAATGTTGAAACCATGGCGGTATTGAGCATTGGAGGCGGTGATGCTTCTAGAAGAAGAGATTCTATCGTCTTAACTTTTAAAGACGCGAAAATTTCAGTTCTAGAATATGATGATTCCATCCATGGACTTCGAATTAGTTCTTTGCATTGTTTTGAGGGTCCAGAGTGGCTTCATTTGAAAAGAGGCAGAGAACAATTTGCAAGAGGCCCGTTGGTAAAGGTTGATCCCCAAGGCAGGTGTGGCGGAGTTCTTGTCTATGATTTGCAAATGATTATACTTAAGGCTACTCAGGCTGGGTCTGGTTTAGTTGGAGAGGATGATGCATTGGGTTCTGGAGGCTCTGTTGCTGCTCGTATAGAGTCATCTTATATTATGAGTCTACGAGACTTGGATATGAGGCACGTAAAAGATTTTACTTTTGTACATGGCTATATTGAACCTGTGATGGTGATCCTGCATGAAAGGGAGCCTACTTGGGCTGGGCGCATCTCATGGAAGCATCATACTTGCATGATATCTGCACTTAGTATCGGCACGACTTTGAAGCAGCATCCGCTCATATGGTCAGCTGTTAATCTTCCCCATGATGCCTACAAGCTTCTTGCAGTACCTTCACCAATAGGTGGTGTTCTTGTTTTTGGTGCTAATACTATTCATTATCACAGTCAGTCTGCTTCATGTGTATTGGCGTTGAATAGTTATGCTGTTTCACTTGATAGTAGTCAAGAGATGCCAAGATCAAGTTTCAATCTGGAGCTTGATGCTTCCCATGCAACTTGGTTGTTGAGTGATGTGGCCTTGCTGTCAACAAAAACTGGTGAACTGCTGTTGCTTACTCTTGTTTATGATGGAAGGGTAGTGCAGAGACTTGATCTTTCCAAGTCAAAAGCTTCAGTTTTGTCATCTGGTATTACGCCAATTGGAAATTCTCTGTTTTTCCTTGCCAGCCGATTAGGAGACAGTATGCTGGTGCAATTTTCTTGTGGATCAGGAATTTCGATGCTGTCTTCCAATATAAAGGAAGAGGGTGGTGATATAGAAGGTGATGCTCCTACAGCAAAGCGACTACGCAGATCACCATCTGATGCTTTGCAAGATATGGTTAGTGGTGAGGAGCTCTCCTTGTTTGGGTCTACCCCAAATAGAACGGAATCAGCTCAGAAAACCTTCTCATTTGCTGTGAGGGATTCATTGATTAATATTGGTCCTTTGAAAGACTTCTCATATGGTCTAAGGATAAATGCGGACGCCAACGCTACTGGAATTGCTAAACAAAGTAACTACGAACTGGTGTGCTGTTCTGGTCATGGAAAGAATGGTTCTCTCTGTATTCTTCGGCAATCAGTTCGCCCAGAAGTGATAACTGAGGTTGAACTTCCTGGTTGCAAAGGAATTTGGACTGTTTATCATAAGAACACACGCTCTCATAATGCTGATTCTTCTAAGCTGGCTGATGATGACGACGAGTATCATGCATATCTTATCATAAGCTTGGAGGCTCGCACTATGGTACTGGAAACAGCTGATCTTCTGAGTGAGGTTACTGAAAGTGTTGACTATTATGTTCAGGGAAAAACAATTTCTGCTGGGAACTTATTTGGAAGGCGTCGAGTAATTCAAGTCTATGAACGTGGTGCTCGCATTCTAGATGGCTCTTTTATGACCCAAGATGTAAGCTTTGGAGCTTCAAATCCTGAATCTAGTTCGGGATCTGAGAGTGCTATTGTGCTGTCTGTCTCTATAGCTGATCCATATGTCTTACTCAGAATGAGTGATGGAAGTATTCGACTTCTGATTGGAGATCCTACTACCTGCACTGTTTCTGTCACTACTCCTTCATTTGAGGGCTCAAAAAGATCAGTATCTGCATGTACGCTTTATCATGATAAAGGACCTGAGCCATGGCTAAGGAAGACAAGTACTGATGCATGGCTTTCTACTGGTGTTGGTGAGGCAATTGATGGCACTGACGGTGCAGCTCAAGATCATGGGGATATTTATTGTGTAGTTTGTTATGAAAATGGTGCCCTTGAAATATTTGATGTGCCCAATTTCAGTTGTGTTTTTTCTGTGGAAAAATTTATGTCTGGAAAGAGCCACCTTGTTGATATTCTCATGAAGGAGGTTCCAAAAGATTCTCAAAAAGTTGATGGAGGTTCTGATGGAGTGACCAACCAAGGCAGGAAGGAAAATGTACAGAATATGAAGGTTGTAGAGCTGGCCATGCAGAGATGGTCAGGGCAGTATAGCCGTCCATTCCTTTTTGGGATCTTGAGTGATGGAACGATTCTTTGTTACCAAGCTTACCTTTATGAAAATTCAGATGGTACTTCCAAAGCTGAGGATTTAGCACCTGCGCAAGGACCTGTGGGCCTTAACAGTACTAATGCTTCTAGGCTTAGAAATTTGAGATTTGTTCGTGTCCCCTTAGACATATATGCCAAGGAGGAGACATCGAGTGGATCTCCTTGTCAGAGAATTACTATTTTCAAGAATATAGGTGGTTATCAAGGATTTTTCCTATCGGGGTCAAGAACTGCTTGGGTTATGGTGTTGAGAGAACGGCTTCGTGTTCACCCACAGCTATGTGATGGATCCATTGTTGCTTTTACTGTCCTTCACAATGTGAACTGCAATCATGGTCTCATATATGTAACATCACAGGGTGTTCTAAAGATCTGCCAGCTTCCTTCTGGTTCAAGCTACGATAACTACTGGCCTGTACAGAAAATTCCGCTAAAAGCCACTCCACATCAAGTAAGCTACTATGCAGAGAAGAATTTGTACCCGCTTATTGTCTCAACTCCTGTTCTTAAGCCACTTAATCAAGTTGTTTCATCTTTGGGGGATCAAGAAGTCAACCAACAGACTGAGAATCAAAATTTGAGCTCTGATGAACAAAACCGCTTTTACAGTATTGATGAATTTGAGGTTCGTATTATGGAGCCAGAAAAATCTGGTGGCCCTTGGCAAACAAAGGCAATTATACCTATGCAAAGTTCAGAAAATGCCCTTACTGTGAGAATGGTTACGCTGTTGAATACAGAAACTAAAGAGAATGAAACGCTTTTAGCTATTGGCACTGCTTATGTGCAAGGAGAAGATGTTGCTGCGCGAGGGCGAGTCCTTCTATTTTCTTTGGGAAAAAATTCTGATAATAGTCAACCTCTGGCTTCTGAAGTTTACTCAAAAGAACTGAAAGGTGCTATATCTGCTTTGGCCTCACTTCAAGGCCATCTATTAATAGCTTCCGGTCCTAAAATTATTCTGCACAAGTGGACTGGTACTGAGTTGAATGGTATTGCATTTTTTGATGCTCCACCATTACATGTTGTGAGCTTAAATATTGTAAAAAATTTTATTCTTATTGGTGACATCCATAAAAGCATTTACTTTCTTAGTTGGAAGGAACAGGGTGCTCAACTTAGCTTATTAGCCAAGGACTTCGGTTCTCTTGATTGTTTTGCAACTGAGTTTTTGATTGATGGAAGTACTTTGAGTCTCATGGTTTCAGATGATCAAAAGAACATCCAGATTTTTTACTATGCACCAAAGATGTCCGAGAGCTGGAAGGGACAGAAGCTTCTGTCAAGGGCTGAATTTCATGTTGGTGCCCACGTGACTAAATTCTTGCGGCTACAGATGCTGTCGACCACCTCTTCTGATCGGACTGGTTCTGGTCCAGGCTCAGATAAAACCAATCGTTTTGCTTTATTATTTGGTACCCTGGATGGCAGTATTGGTTGTGTTGCACCTCTTGATGAAATTACATTTCGTAGGCTGCAGTCATTACAGAGAAAGCTAGTTGATGCTGTACCACATGTTGCTGGCTTAAATCCAAGAGCTTTTAGACAGTTCCGTTCAAATGGAAAGGCTCATCGACCTGGCCCTGACAGTATAGTTGACTGTGAATTATTAAGCCATTATGAAATGCTTCCGTTGGAGGAACAGCTTGAAATTGCTCACCAGAGAAGTGCGCCACTAAGTTGTTGGCGATTGCAATCTGTATAG 4344 0.4284 MSFAAYKMMHCPTGIENCASGFITHSRADLVPRIPPIQTDDLDSEWPARREIGPIPNVIITAANVLEVYIVRVQEEGSRESKGHVESKRGALMDGLTGASLELACHYRLHGNVETMAVLSIGGGDASRRRDSIVLTFKDAKISVLEYDDSIHGLRISSLHCFEGPEWLHLKRGREQFARGPLVKVDPQGRCGGVLVYDLQMIILKATQAGSGLVGEDDALGSGGSVAARIESSYIMSLRDLDMRHVKDFTFVHGYIEPVMVILHEREPTWAGRISWKHHTCMISALSIGTTLKQHPLIWSAVNLPHDAYKLLAVPSPIGGVLVFGANTIHYHSQSASCVLALNSYAVSLDSSQEMPRSSFNLELDASHATWLLSDVALLSTKTGELLLLTLVYDGRVVQRLDLSKSKASVLSSGITPIGNSLFFLASRLGDSMLVQFSCGSGISMLSSNIKEEGGDIEGDAPTAKRLRRSPSDALQDMVSGEELSLFGSTPNRTESAQKTFSFAVRDSLINIGPLKDFSYGLRINADANATGIAKQSNYELVCCSGHGKNGSLCILRQSVRPEVITEVELPGCKGIWTVYHKNTRSHNADSSKLADDDDEYHAYLIISLEARTMVLETADLLSEVTESVDYYVQGKTISAGNLFGRRRVIQVYERGARILDGSFMTQDVSFGASNPESSSGSESAIVLSVSIADPYVLLRMSDGSIRLLIGDPTTCTVSVTTPSFEGSKRSVSACTLYHDKGPEPWLRKTSTDAWLSTGVGEAIDGTDGAAQDHGDIYCVVCYENGALEIFDVPNFSCVFSVEKFMSGKSHLVDILMKEVPKDSQKVDGGSDGVTNQGRKENVQNMKVVELAMQRWSGQYSRPFLFGILSDGTILCYQAYLYENSDGTSKAEDLAPAQGPVGLNSTNASRLRNLRFVRVPLDIYAKEETSSGSPCQRITIFKNIGGYQGFFLSGSRTAWVMVLRERLRVHPQLCDGSIVAFTVLHNVNCNHGLIYVTSQGVLKICQLPSGSSYDNYWPVQKIPLKATPHQVSYYAEKNLYPLIVSTPVLKPLNQVVSSLGDQEVNQQTENQNLSSDEQNRFYSIDEFEVRIMEPEKSGGPWQTKAIIPMQSSENALTVRMVTLLNTETKENETLLAIGTAYVQGEDVAARGRVLLFSLGKNSDNSQPLASEVYSKELKGAISALASLQGHLLIASGPKIILHKWTGTELNGIAFFDAPPLHVVSLNIVKNFILIGDIHKSIYFLSWKEQGAQLSLLAKDFGSLDCFATEFLIDGSTLSLMVSDDQKNIQIFYYAPKMSESWKGQKLLSRAEFHVGAHVTKFLRLQMLSTTSSDRTGSGPGSDKTNRFALLFGTLDGSIGCVAPLDEITFRRLQSLQRKLVDAVPHVAGLNPRAFRQFRSNGKAHRPGPDSIVDCELLSHYEMLPLEEQLEIAHQRSAPLSCWRLQSV 1447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g0627 1447 Gene3D - 975 1363 IPR015943 GO:0005515
Bisa01g0627 1447 PANTHER DNA REPAIR/RNA PROCESSING CPSF FAMILY 8 1434 - -
Bisa01g0627 1447 FunFam Cleavage and polyadenylation specificity factor subunit 1 53 446 - -
Bisa01g0627 1447 Pfam Mono-functional DNA-alkylating methyl methanesulfonate N-term 131 707 IPR018846 -
Bisa01g0627 1447 Gene3D - 55 448 IPR015943 GO:0005515
Bisa01g0627 1447 Pfam CPSF A subunit region 1087 1421 IPR004871 GO:0003676|GO:0005634
Bisa01g0627 1447 FunFam cleavage and polyadenylation specificity factor subunit 1 975 1363 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g0627 Bisa-ChrBisa01 9626912 9646121 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa01g0627 01 9626912 9646121 Bisa01g0627 01 9626912 9646121 ECH