Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g0607 ATGTCTCGAATATTCTCAAGATGGAAGAAGGTGAAGGAAATGGCGATGATTTCTTCTGCGAAGACTCAGTTCGCTGTCTCAGCAAGAACTGGCTATAATTGGACGAGGTTCGGCTTCCAGTTCAATCAGGTGTGCCCAATCTCAACTCACTTGAATTATTTTCACATCACCGTCCATAGACGCCGGGAATCGTTCATCGGCATTCAGGAGCGGTACAAGTGGGGCCACGGTGGCTCCGGTGACACCCATAATCGAAATTCTCAGGCCAGGAAGATTCGAGCAGAGGCTAATTGTCCACGGTGCGCCAAGCACATGGATGTATTTTTCTCCAATCGCCAGTTTCCCACTTCTACTCCTGAGTCTAATTTGATCCCACCGGTTCCTCTTTATGAAGAAGGAGTTTATCAAACTATGAATCTCTGCCCCAATTGTAAAACTGCCTATTACTTCCGCCCTTATAACACGGCTCCCCTCCAAGGTACATTCGTAGAGATTGGTAGAGTCACAAATAATAATGTTAATACTACTACTAATAAATTGCAGAAGAGGGTTTCCCATGGCAAAGCCAAAGATGACAGGGAAAGTAATACCGGTCAAGGTGGTGACAGTGGAGCAGAAGATTATGCCCATAGAAGGGATAGCAATACTGGGTTTAGAGAGTCATTCTGGAACACTTTAAGATCTTACAGTGATGGAGATGGTGGAGAACCACCAGAAACGTGGTCTCCCCCACCTGGTTCCTCTAATGGTAATGGGTTGGCTGTGCATACTCCTCCAGGTCCACCTTTTGCACCCGGTGTTAATGTAGTTCGGGCTTCAGGGCCACGGGAGGGTGGTTCAAGTGGTGGAGGTGGCAGTAACGGAGAGAAGACTTCATGGGGAGGCTCCAATTTGGGTAAGGATTTACCCACACCAAAGGAGATCTGCAAGGGTCTTGATAAGTTTGTTATAGGCCAGGAAAGAGCCAAAAAGGTGCTTTCTGTAGCTGTTTATAACCATTATAAAAGAATACACCAAGCCTCTTTACAGAAAGGGTCTGGGGCAGATTCAGGAATTTCAAAAGCTCTAGATGATGACGATAATGTGGAGCTAGAAAAGAGTAATGTCCTCTTGATGGGTCCGACTGGTTCAGGGAAGACATTGCTTGCAAAAACTCTAGCTCGATTTGTGAATGTTCCATTTGTCATTGCTGATGCAACAACTTTAACACAGGCTGGTTATGTTGGAGAAGATGTTGAATCAATATTGTATAAACTACTTGTGACAGCTGAGTTCAATGTTCAAGCCGCACAACAAGGGATTGTTTACATTGACGAAGTTGACAAGATAACTAAGAAGGCTGAGAGCTTAAATATTAGCCGGGATGTTTCTGGTGAGGGTGTTCAGCAGGCATTATTAAAAATGTTGGAAGGAACTATAGTAAATGTTCCTGAGAAAGGAGCAAGGAAGCATCCACGGGGGGATAACATACAGATTGACACAAAGGATATTCTTTTTATATGCGGTGGGGCATTCATTGATCTTGACAAAACCATATCAGAGAGACGACAAGATTCTTCTATTGGCTTTGGAGCCCCAATTCGTGCAAATATGAGAACTAGTGGAGTAATAAATGTGGCAGTAACATCATCATTACTTGAGTCGGTGGAAAGTGCTGATCTTATTGCATATGGTCTCATACCTGAGTTTATTGGACGGTTTCCAATCTTAGTTAGTTTGTCAGCTTTAACTGAAGACCAACTTGTGCAGGTCCTCACAGAACCTAAAAATGCTCTTGGTAAGCAGTACAAGAAATTAATTGGCATGAATAATGTAAAGCTACACTTCACAGATAATGCACTGAGACTGATTGCAAAGAAAGCAATGGCCAAGAATACTGGTGCCAGGGGTTTAAGAGCCATACTGGAAAGCATCCTAACTGATGCCATGTTTGAGATTCCAGATGCTAGGACTGGGAAAGACCTGATTGATGCAGTTGTTGTTGATGAGGAGTCAGTAGGATCGGTAAATGCCCCCGGATGTGGAGGCAAAATTCTTCGTGGATGTGGTGCTTTGGAGCGTTTCCTAGTAAAGACGAAGGATTCAATGGTGAACGGTGAGGCAGCTGAATCAGATGTACAAGAGGGGGAATCGGAGCTTTCGTCAAGAGCCATGAGCATGTGA 2163 0.4424 MSRIFSRWKKVKEMAMISSAKTQFAVSARTGYNWTRFGFQFNQVCPISTHLNYFHITVHRRRESFIGIQERYKWGHGGSGDTHNRNSQARKIRAEANCPRCAKHMDVFFSNRQFPTSTPESNLIPPVPLYEEGVYQTMNLCPNCKTAYYFRPYNTAPLQGTFVEIGRVTNNNVNTTTNKLQKRVSHGKAKDDRESNTGQGGDSGAEDYAHRRDSNTGFRESFWNTLRSYSDGDGGEPPETWSPPPGSSNGNGLAVHTPPGPPFAPGVNVVRASGPREGGSSGGGGSNGEKTSWGGSNLGKDLPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYKRIHQASLQKGSGADSGISKALDDDDNVELEKSNVLLMGPTGSGKTLLAKTLARFVNVPFVIADATTLTQAGYVGEDVESILYKLLVTAEFNVQAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGDNIQIDTKDILFICGGAFIDLDKTISERRQDSSIGFGAPIRANMRTSGVINVAVTSSLLESVESADLIAYGLIPEFIGRFPILVSLSALTEDQLVQVLTEPKNALGKQYKKLIGMNNVKLHFTDNALRLIAKKAMAKNTGARGLRAILESILTDAMFEIPDARTGKDLIDAVVVDEESVGSVNAPGCGGKILRGCGALERFLVKTKDSMVNGEAAESDVQEGESELSSRAMSM 720
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g0607 720 CDD RecA-like_ClpX 303 573 - -
Bisa01g0607 720 SMART ClpB_D2_small_2 576 666 IPR019489 -
Bisa01g0607 720 PANTHER ATP-DEPENDENT CLP PROTEASE ATP-BINDING SUBUNIT CLPX-LIKE, MITOCHONDRIAL-RELATED 93 694 - -
Bisa01g0607 720 Pfam C-terminal, D2-small domain, of ClpB protein 576 647 IPR019489 -
Bisa01g0607 720 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 301 661 IPR027417 -
Bisa01g0607 720 SMART AAA_5 365 528 IPR003593 GO:0016887
Bisa01g0607 720 FunFam ATP-dependent Clp protease ATP-binding subunit ClpX 575 678 - -
Bisa01g0607 720 MobiDBLite consensus disorder prediction 174 213 - -
Bisa01g0607 720 Pfam AAA domain (Cdc48 subfamily) 365 569 IPR003959 GO:0005524|GO:0016887
Bisa01g0607 720 FunFam CLP protease regulatory subunit CLPX3 mitochondrial 296 574 - -
Bisa01g0607 720 NCBIfam ATP-dependent protease ATP-binding subunit ClpX 299 666 IPR004487 GO:0005524|GO:0006457|GO:0051082|GO:0140662
Bisa01g0607 720 MobiDBLite consensus disorder prediction 284 298 - -
Bisa01g0607 720 MobiDBLite consensus disorder prediction 699 720 - -
Bisa01g0607 720 MobiDBLite consensus disorder prediction 225 304 - -
Bisa01g0607 720 Gene3D - 575 675 - -
Bisa01g0607 720 Gene3D - 296 574 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g0607 Bisa-ChrBisa01 9404812 9416112 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa01g0607 01 9404812 9416112 Bisa01g0607 01 9404812 9416112 ECH