Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach9g01209 ATGGATGGTTATGAAGCTACAAGAATTGTCTTCTCGAGGATCCAGAACTTGGACCCTGAAAATGCCTCCAAAATCATGGGTCTACTTCTGATTCAAGACCATGGTGGGAAGGAAATGATTAGATTAGCATTTGGCCCTGAATCCCTAGTTCACTCAGTGATTGTCAAAGCTAGGAAAGAGTTGGGGTTGCCCTCGAACTCTCCGTCTACCCCTTCAACTCCTTCATCCCCATCCCCTTTTCTCTCCAGCAACTCAGTTCCTATTTCCAGGCAAAATTCCACTTCTTCCAGGCTCTTAAACACTAGTGGAATTAACCTTCCTGCTGCTCTTAGCATCCCTAACCCTTCCTCTGCTAATTCAGCTTCTTGGGCTACTCTCTCTGACCTTCAAAACCCGGAGGATTTGATGAGCCCTAACAATTTAGTTGTTGGCTCGTCTACTTCTACAATCAACTCTTCCTCTTCCTTACCCTTCTATGGAAATGGAGGATCGGACCCAGTTGATGAATTTCAACTTCAGGACCAGCTTTCTTTCCTTAATGATGGCTCACCCACCCTTGGGCTCAAAAACTCAGATTTGTTTTACCCTTCGTCTGACTTGTCTTCTAGTCCAACTGGTGGTGGCGGCGACCCTACTCTCTTTCCTTCGTATGGTTGGGGTGGTTCCCTCCACCGCCGAAGTTATTCTGTCAACGATGCTTGTTTGGGGTCTGAGGACCCAAATTCTGGACTTGGATGGAAGCCTTGCCTTTACTATGCGAGAGGGTACTGCAAAAATGGAACTAGCTGCAGGTTCCTTCATGGAGGCCTAGCAGATTCTGATGGTGCTGCATTGGTTGGGTCCCCAAGCAAGTTTGAGATGATGGACCAGTGCCAGGAGCTTCTCAGATCTAAAACTGCTCAGCAGCAGAGACTTGCTGCTGCTTCTCAGCTTATGGCCTCTTCTTCCTTCCCTTACTCCCCCAAGTGCATGAATTTTCTGCTTCAGCAGCAGCAGCAGAATGATACTCAAAGGGCTGCTGCAGCTTTGATGATGAACGAGGATTTGCAGAAGTTTGGGCGATCTCGGCTTGAAAGGAATGATTTTTTGAATGGAGGTCCCGGAATGGTTAACCCAGCTTCAAGGCAGATCTACTTGACTTTCCCCGCTGATAGCACTTTCAGAGAGGAAGATGTGTCAAATTACTTTAGCATTTACGGGCCTGTGCAAGATGTGAGGATCCCATACCAGCAGAAGCGTATGTTTGGGTTCGTAACCTTTGTTTATCCTGAAACTGTGAAGCTCATTCTGTCTAAGGGGAATCCTCATTTCGTTTGTGATGCTCGAGTGCTTGTCAAGCCTTACAAGGAAAAGGGCAAAGTTCCAGACAAGTACAGGAAACAGCAGCAGCAACAACAGGTGGATAGGGGAGAGTACTCCCCTTGTGGTACCCCTACTGGGCTTGATGCAAGAGACCCATATGATATCCAACTTGGAGGGAGAATGTACTACAATGCTCAAGACATGCTGTGGAGGAGGAAGTTGGAGGAGCAGGCTGATTTGCAGCAAGCTCTTGAGCTGCAAAGTAGAAGGCTGATGGGTCTGCAGCTTCTTGACATTAAGAAGCAGCACCATCGAGCACCTTCCACAGGAAGTCCAATTCCATCCCCAACTCACTCTCCAAACATATTTAACCAGAATCTTTGTCTTCCTTCGTTCCACAATGGCCCAGAGGTCCCAGAGGAGAGTGGTTCGAGTTCAGCTCCTGCTAGCACTGCATCAATTCCGGTTGATCAGCAGCAATTGCAGCAGACAGTCAACGTTTCTGTTGGCAAAGAAGTGACAGCCAATGGTGAGAATGGAAATAGCGATGGCAGTGGCAAGCAGAGCTCCAATCAAGTAGACAGTGATTTGCAAGAATGCTTGGAACATAATCTCCCTGATAGCCCTTTTGCATCCCCCACTAAAGCTGGAAACTACATGGCTACCTTTTCCAATGGACCCAATGATGCCATTGATTCAGATGCCCCAGCTGCATCAGCAAATTCTAAATTTGGTACCAATACATTACTTCCAGCTGCATCTGCTCTGGACATGGGGACTTTCAAATCCTTTAATTGCCAATCAAGGTTCTCCTCCAGCCATGGCACCATCGGAATGTTTGCTGGCACCGGTGGGCCAATTGGCATTTAATTCCCTGGTCTTCTCCCAGGAAGCAGAGAAGTATGACCATACAAACCCTCAACATCCAACAAATCTGTAGAGAATCATCACCACTACGGCCATCACCATCATCATCAATACTATACTACTTACTACCATACAAAATGCATACGTAAAAAGCAGTCAGTAAAGGAAGTGGGGCAGCCATTTTCTTTCTTTTGTTATTATTGTACCATTTTCCATCTTCTCATTTCTGTAGTAGAAGTTGAACCACAGGTAAAAATAACACAGAAAAAGTCACGTGTAGTAGGAACTCCTGGCGCACTGTAATTTCT 2477 0.4651 MDGYEATRIVFSRIQNLDPENASKIMGLLLIQDHGGKEMIRLAFGPESLVHSVIVKARKELGLPSNSPSTPSTPSSPSPFLSSNSVPISRQNSTSSRLLNTSGINLPAALSIPNPSSANSASWATLSDLQNPEDLMSPNNLVVGSSTSTINSSSSLPFYGNGGSDPVDEFQLQDQLSFLNDGSPTLGLKNSDLFYPSSDLSSSPTGGGGDPTLFPSYGWGGSLHRRSYSVNDACLGSEDPNSGLGWKPCLYYARGYCKNGTSCRFLHGGLADSDGAALVGSPSKFEMMDQCQELLRSKTAQQQRLAAASQLMASSSFPYSPKCMNFLLQQQQQNDTQRAAAALMMNEDLQKFGRSRLERNDFLNGGPGMVNPASRQIYLTFPADSTFREEDVSNYFSIYGPVQDVRIPYQQKRMFGFVTFVYPETVKLILSKGNPHFVCDARVLVKPYKEKGKVPDKYRKQQQQQQVDRGEYSPCGTPTGLDARDPYDIQLGGRMYYNAQDMLWRRKLEEQADLQQALELQSRRLMGLQLLDIKKQHHRAPSTGSPIPSPTHSPNIFNQNLCLPSFHNGPEVPEESGSSSAPASTASIPVDQQQLQQTVNVSVGKEVTANGENGNSDGSGKQSSNQVDSDLQECLEHNLPDSPFASPTKAGNYMATFSNGPNDAIDSDAPAASANSKFGTNTLLPAASALDMGTFKSFNCQSRFSSSHGTIGMFAGTGGPIGI 723
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach9g01209 723 Gene3D - 374 473 IPR012677 -
Bach9g01209 723 SMART c3hfinal6 245 269 IPR000571 GO:0046872
Bach9g01209 723 PANTHER RNA-BINDING (RRM/RBD/RNP MOTIFS) 1 650 - -
Bach9g01209 723 MobiDBLite consensus disorder prediction 76 94 - -
Bach9g01209 723 MobiDBLite consensus disorder prediction 572 588 - -
Bach9g01209 723 ProSiteProfiles Zinc finger C3H1-type profile. 243 270 IPR000571 GO:0046872
Bach9g01209 723 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 387 432 IPR000504 GO:0003723
Bach9g01209 723 SUPERFAMILY CCCH zinc finger 246 268 IPR036855 GO:0046872
Bach9g01209 723 Gene3D - 238 335 - -
Bach9g01209 723 MobiDBLite consensus disorder prediction 454 479 - -
Bach9g01209 723 MobiDBLite consensus disorder prediction 542 565 - -
Bach9g01209 723 FunFam zinc finger CCCH domain-containing protein 53-like isoform X2 382 453 - -
Bach9g01209 723 SUPERFAMILY RNA-binding domain, RBD 387 472 IPR035979 GO:0003676
Bach9g01209 723 MobiDBLite consensus disorder prediction 607 629 - -
Bach9g01209 723 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 375 451 IPR000504 GO:0003723
Bach9g01209 723 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 248 268 IPR000571 GO:0046872
Bach9g01209 723 CDD RRM_AtC3H46_like 377 446 IPR034365 -
Bach9g01209 723 MobiDBLite consensus disorder prediction 62 94 - -
Bach9g01209 723 MobiDBLite consensus disorder prediction 537 588 - -
Bach9g01209 723 SMART rrm1_1 376 446 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach9g01209 Bach-Chr9 9562968 9566351 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach9g01209 - - qlo:115983719 1036.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach9g01209 9 9562968 9566351 Bach9g01209 9 9562968 9566351 ECH