Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach9g00802 CCTCCCTCAAAACCCTATTGCGTGTTTTGCAATCGACCTAGACAATGGCCAACAGTAACCTCCCTCGAAGAATCATCAAGGAAACTCAGCGTCTCCTCAGTGAGCCAGCCCCTGGAATTAGTGCTTCACCTTCTGAAGACAATATGCGATATTTTAATGTGATGATCCTTGGGCCAACTCAGTCACCTTATGAAGGAGGGATTTTCAAGCTAGAACTATTTTTGCCAGAAGAATATCCAATGGCCGCTCCTAAGGTTCGTTTTTTGACAAAAATATATCATCCAAACATTGATAAGCTTGGCAGGATATGTCTTGATATTTTGAAAGACAAGTGGAGCCCTGCACTTCAGATACGCACTGTTCTTTTGAGCATTCAAGCACTTCTGAGTGCACCAAACCCAGATGATCCACTTTCTGAGAACATTGCTAAGCATTGGAAAACAAATGAAGCCGAGGCTGTCGAAACAGCGAAGGAATGGACCAGATTATATGCTAGTGGTGCCTGATACTATGGTGGAAACTTTTGG 527 0.4345 MANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGIFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEAEAVETAKEWTRLYASGA 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach9g00802 153 SMART ubc_7 8 151 - -
Bach9g00802 153 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 5 151 IPR000608 -
Bach9g00802 153 FunFam Ubiquitin-conjugating enzyme E2 36 1 152 - -
Bach9g00802 153 Pfam Ubiquitin-conjugating enzyme 9 145 IPR000608 -
Bach9g00802 153 PANTHER UBIQUITIN-CONJUGATING ENZYME E2 33 138 - -
Bach9g00802 153 Gene3D Ubiquitin Conjugating Enzyme 1 152 IPR016135 -
Bach9g00802 153 ProSitePatterns Ubiquitin-conjugating (UBC) active site signature. 78 93 IPR023313 -
Bach9g00802 153 CDD UBCc 7 146 IPR000608 -
Bach9g00802 153 SUPERFAMILY UBC-like 7 151 IPR016135 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach9g00802 Bach-Chr9 5655117 5658527 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach9g00802 8 118 Miscellaneous Gene Families AT3G17000 29.915 7.33e-12 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach9g00802 K10580 - rcu:8282135 310.842
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach13g00734 13 12940041 12943105 Bach9g00802 9 5655117 5658527 BWGD
Bach9g00802 9 5655117 5658527 Bach9g00802 9 5655117 5658527 ECH