LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bach9g00475	ATGGCAAGGATTCTTTCGGAGCTTGTTGATGATCCTCTGAAGAATTCAAAGGATTCTTTTGAGATTATCGACGCTCAAGCTAACGACTTTTCATTCGCTGATTCCTTCCTCGATTTCGATTCTATAGAGGATTATTTTGAAGATAAACCAGCTGCGGAAATGGCTGCCGTAGAGACTAACAACATCGTCGTTGAAGACAAGCCTAATAAGATGGTTAAGGACGAATGTTCTGAAGAAACTACTGTCCTAGACCAACAAATCCTTACCGGGTCCGAGTCTGTCATTGGATCTACTTGTGTGGTGAAGGTGGACACGACAGAGAGTGAAATTTTGGGGAGTTCCAGCTGTCCTATTGAAGATGGGGTAAAGAATGAGTCTGAGCCAGTTGAAGTTGGGTCTACAAGTTTGGTGAACATGGAAGCAGGGGAGTGTGAAAAATTGCGGACTTCAAGTTGCACTATTGAGGAAGGGTTGGGGAAAATTAGTTTAGTTGGTGGGTCACAAAGTTCAGTTATAATTGATGGGAATGATGGGAAGAGTGACATGATGACTGATGAGCATGAGAGTGAAAGTTCAGAATCGGAATCTGCTGATCCATCTTCACCATCATCTTCAAGTTCATATCACAGTAATAGTAGCAGTGATAGTGGTAGTGGTAGTACTGCAAGTGATGATGACGATGCCGATGGTGGCAGTGAGGAAGAGGAGAAAGAGGAAGAGAAGACAGAGCATACTGATGTGGAAATCGAAGAAGGAGAGATAAGAGATTCTGCAGGAGAAAATCTGGATACTGAAACAACAGCTACTGCGGCTGATGATGAAGATGTAGAGAAGATGATTAGTTGGAGTGGCATTAATGATGATGATGTAGATGACTCGGATTATGAATATGAAGATGAAGATGGTAGTAGACATGCTACAAAAGAACCTACTAGGTCAAAGAATGAGCTTGAGACTCTTCCTCCAGTTCCTTCAGTGGATGTTACCTTACAACCACACCATCAATTGCTGGCAGTGGGAGTTGTTATGTCGATTATGGGTGTCCAAGTCATTGTTGAAGGGGTGGAGAAGCACGACCCTCTTAACGAGGGTTCGATTCTCTGGATTACAGAAAGCAGAAGAGCACTAGGGTTGGTTGATGAAATCTTTGGACCTGTCAAAAACCCTTATTATGTTGTGAGGTACAACTCTGAACATGAAATCCCTGAGGAAACCCATGTGGGCACTCAGATCTCTTTTGTTCCAGAGTTTGCTAATCATGTGCTTAATAACAAGGATCTTTACAAGAAAGGATATGATGCATCTGGTATGAATGATGAAGAGTTGACTGATGGAGAGATGTTTTCAGATGACGAGAAAGAGGCTGAATTTGAGAAATCGCGCAGAATGACAAAGAGAGGCATCAATGATCAGAATCCTAGAAAGATGAGAAACAATAGAAAGAAAGTACCACAAAATGAGGGCGTGGTACCTTCCTGTTCTGTTGTGCCTGCCACAACATTGTTTGCTCGTGGAAATTGTTCAACCTTCTTAGGCCCAGGACAAGGTGTTACGGAAAGTCCCTTAGTTCCTCCATTTCAACCGCCGACATCTGGTCATAACCCACTTACAAACGGACTTTGGACAAATTGCACAACATTTCCGCAGCCACAATCTTTTAGACCTCATAAAGCATTAACTACCAATGGCATATCATGGTTCCAAGAAAATACTCAAAATTCTTATCAGTTACCAGTGCTAGGAATTCCATTTCAACCGCAGTTAAATCCCAATCAAGCATCACTTTCAACGACTATGTTGCCTGGGATGCGGCCCAATATATATCAACAACCCATGTTTGCACCGGCGCTTGCGAATCAAAATCAGATGACATTTGGTCTGGGTTTACACCCTCCACAGATGCAGCCACTTCTATCTGCAGAACAAGGGTTTTTGTCCAATGAATGGTTAGAAAGAAACAATAATTCGCATTCTGGTACTAATCCAGGCCGTCCTCGTACTCCCCATCAATTTCATCGAGGAACACCTGGTAATCGTGGAAGAAAAGCATTTCAAAGAGGGGGTAGGAAAGGCTGGCGACAAGCCTAGTTAAAGGTTATTGTGTACTCCCCTGTCCAAGGGGAAAAAAAAATTCTCATGTAGTTGGGCCATGAAGACAATTTGCGCTTTGCCTTGTGATTTTCTTAAAGCC	2191	0.4281	MARILSELVDDPLKNSKDSFEIIDAQANDFSFADSFLDFDSIEDYFEDKPAAEMAAVETNNIVVEDKPNKMVKDECSEETTVLDQQILTGSESVIGSTCVVKVDTTESEILGSSSCPIEDGVKNESEPVEVGSTSLVNMEAGECEKLRTSSCTIEEGLGKISLVGGSQSSVIIDGNDGKSDMMTDEHESESSESESADPSSPSSSSSYHSNSSSDSGSGSTASDDDDADGGSEEEEKEEEKTEHTDVEIEEGEIRDSAGENLDTETTATAADDEDVEKMISWSGINDDDVDDSDYEYEDEDGSRHATKEPTRSKNELETLPPVPSVDVTLQPHHQLLAVGVVMSIMGVQVIVEGVEKHDPLNEGSILWITESRRALGLVDEIFGPVKNPYYVVRYNSEHEIPEETHVGTQISFVPEFANHVLNNKDLYKKGYDASGMNDEELTDGEMFSDDEKEAEFEKSRRMTKRGINDQNPRKMRNNRKKVPQNEGVVPSCSVVPATTLFARGNCSTFLGPGQGVTESPLVPPFQPPTSGHNPLTNGLWTNCTTFPQPQSFRPHKALTTNGISWFQENTQNSYQLPVLGIPFQPQLNPNQASLSTTMLPGMRPNIYQQPMFAPALANQNQMTFGLGLHPPQMQPLLSAEQGFLSNEWLERNNNSHSGTNPGRPRTPHQFHRGTPGNRGRKAFQRGGRKGWRQA	695

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bach9g00475	695	MobiDBLite	consensus disorder prediction	299	315	-	-
	Bach9g00475	695	SUPERFAMILY	Translation proteins	338	403	IPR009000	-
	Bach9g00475	695	MobiDBLite	consensus disorder prediction	468	489	-	-
	Bach9g00475	695	MobiDBLite	consensus disorder prediction	195	225	-	-
	Bach9g00475	695	FunFam	H/ACA ribonucleoprotein complex non-core subunit NAF1	308	414	-	-
	Bach9g00475	695	MobiDBLite	consensus disorder prediction	179	194	-	-
	Bach9g00475	695	MobiDBLite	consensus disorder prediction	468	482	-	-
	Bach9g00475	695	MobiDBLite	consensus disorder prediction	651	665	-	-
	Bach9g00475	695	MobiDBLite	consensus disorder prediction	165	324	-	-
	Bach9g00475	695	MobiDBLite	consensus disorder prediction	226	241	-	-
	Bach9g00475	695	Pfam	Gar1/Naf1 RNA binding region	338	420	IPR007504	GO:0001522\|GO:0042254
	Bach9g00475	695	Gene3D	Probable tRNA pseudouridine synthase domain	309	414	IPR038664	-
	Bach9g00475	695	MobiDBLite	consensus disorder prediction	651	695	-	-
	Bach9g00475	695	MobiDBLite	consensus disorder prediction	242	260	-	-
	Bach9g00475	695	PANTHER	H/ACA RIBONUCLEOPROTEIN COMPLEX NON-CORE SUBUNIT NAF1	14	638	IPR040309	GO:0000493\|GO:0003723\|GO:0005732\|GO:0042254
	Bach9g00475	695	MobiDBLite	consensus disorder prediction	271	285	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bach9g00475	Bach-Chr9	3413632	3416561	Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Bach9g00475	K14763		-	qsa:O6P43_028771	474.552

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Bach9g00475	9	3413632	3416561	Bach9g00475	9	3413632	3416561	ECH