Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach9g00307 ATGAAGGTTCATGAAACAAGGTCACATGCTCATGCATCTGGTGACGAAGAGAAGGTGATGACAAGGAAGCAGAAAGCAGAGTTCAAGTTACATGAAGCTGAACATTCTCCTAAGAAGGCCAAGCCTGAAAACGACAATGGCGAAACAAATGGGAAATCCACAGTTCATATAGCTGCCGAGTTTGATGAATTCTGTAAAGCCATTAGCGAGCACCTCTCTGTTGATCAAATGCGACAAATTCTCGAAGCTAATTTAATAGATTCCTCTGGCTCTAATCTTGAAGTTTCCCGAAGATGCCAAGACTTGCTGTTCTATGGTGCATTGGAGAAATGCCCAGTTTGCAATGCCAGTTTGGAGTTCGATGGCAGACGTTATTCTTGTAGAGGATTCTATAGTGAGTGGGCTAGCTGCACTTTCAGGACCAGGGACCCTCAAAGGAAACAGGAACCCATTAAATTACCAGATTCTGTTCAGAATGCTGCTTTTTCAGATTTGCTCAAAAAATATCAAGATCCAAATCGAAGGCCTCATAGGGACTTAGGCTCTGCAGACAAGCCCCTAACTGGGATGATGATTTCTTTGATGGGCCGTCTTACCCGCACACATCATTATTGGAAGAAAACTATTGAGAAGCATGGAGGAAAGGTGGCAAACTCTATAATCGGAGCAACTTGTTTGGTGGCTTCGCCTGCTGAGAGAGACCGTGGTGGCACGTCCAAACTTGTAGAAGCTATGGAGAGGGGTATACCTGTAGTGAGGGAGACATGGTTGAGTGACAGTATTGAGAAACAAGAACCACAACCTTTGGAAGCTTATGATCTTGTCTCTGATCTTTCTGTGGCTGGCAAAGGAATACCATGGGACAAACAAGATCCCGGAGAGGAGGCAATTGAATCACTTTCAGCAGAACTCAAGCTTTATGGGAAGAGGGGAATCTATAAAGATACCAAATTGCAGGAACAAGGTGGACAAATAGTTGAAAAAGATGGAATATTATACAACTGTGCCTTCTCGCTTTGTGACCAAGGGCGAGGAGTGAATGACTACTGTGTTATGCAACTGATTATGGTTCCAGAGAATCGTTTGCATCTGTACTACAAGAAAGGTAGAGTTGGCGATGATCCAAATGCAGAGGAACGGCTAGAAGAGTTTGAGAACGTTGACAATGCTATGAAAGAGTTTGTGAGGCTCTTTGAGGAAATAACAGGCAATGAATTCGAACCTTGGGAAAGAGAGAAGAAGTTCCAGAAGAAGCCAATGAAGTTTTATCCCATTGACATGGATGATGGAGTTGAAGTGAGACATGGGGCTCTAGGTCTTCGGCAGCTTGGGATAGCAGTAACACACTGCAAACTGGAGCCTCTGGTTGCTAATTTTATGAAGGTTTTCTGCAGCCAGGAGATATACAAGTATGCATTGATGGAGATGGGTTATGATTCCCCTGATCTACCAATAGGGATGGTCACAAATCTTCACCTGAAGAGATGTGAGGAAGTTCTCCTAGAATTCATAGAGAAGGTGAAATCAATGAAAGAGACTGGACCAAAGGCTGAGGCTGTTTGGGCGGATTTTAGCCAAAGATGGTTTACTCTGATGCACTCTACAAGGCCTTTGATTTTCAGAGATTACCAGGAGATTGCAGAGCATGCTGCTTCTGCGTTGGAGGGTGTTAGGGACATAACTGTGGCTTCTCATCTCATAGGAGATATGAGTGGCTCTACAATTGATGACCCGTTATCAGATAGATACAAGAAATTAGGTTGCTCAGTTTCTCCACTGGAGAAAGATTCAACTGATTATGGGATGATTGTTAAATACCTGGAGAGAACTTATGAACCCGTCAAAGTTGGGGACATTGAATACGGGGTGACTGTAGATAATATTTTTGTTGTGGAACCGAGTGCTTGCCCTTCCTATGAAGACATTGTAAAGCTGCCAAACAAGGTGCTTCTATGGTGTGGTTCACGAAGCTCAAATCTTCTGAGGCACTTGCAAAAGGGGTTCTTGCCAGCAATATGCTCACTGCCGGTTCCTGGTTATATGTTTGGCAAAGCTATTGTTTGTTCTGATGCTGCAGCAGAGGCTGCAAAGTATGGTTTTACAGCTGTGGACAGACCAGAAGGGTTCTTGGTTTTGGCCATTGCTTCTCTAGGAAATGAGATTACAGAGCTGAAAAGCCCACCTGAGGACACCAAATCATTGGAAGAAAAGAAGCTTGGGGTAAAGGCGCTGGGAAGGAAGAAGACAGATGAATCAGAGCACTTTGTTTGGAAAGATGATATTAAAGTCCCTTGTGGCCGTATAGTTGAATCAGAACATAAAGACAGCCCACTGGAGTACAACGAATATGCCGTGTACGATCCTAAACAGGTTCGCATAAGTTACTTGGTGGGAGTGAAATATGAAGAGAAGGATGAGGTGATGGACACTGCAGAGGGAACGAACGAAAGAGCTTGA 2457 0.4396 MKVHETRSHAHASGDEEKVMTRKQKAEFKLHEAEHSPKKAKPENDNGETNGKSTVHIAAEFDEFCKAISEHLSVDQMRQILEANLIDSSGSNLEVSRRCQDLLFYGALEKCPVCNASLEFDGRRYSCRGFYSEWASCTFRTRDPQRKQEPIKLPDSVQNAAFSDLLKKYQDPNRRPHRDLGSADKPLTGMMISLMGRLTRTHHYWKKTIEKHGGKVANSIIGATCLVASPAERDRGGTSKLVEAMERGIPVVRETWLSDSIEKQEPQPLEAYDLVSDLSVAGKGIPWDKQDPGEEAIESLSAELKLYGKRGIYKDTKLQEQGGQIVEKDGILYNCAFSLCDQGRGVNDYCVMQLIMVPENRLHLYYKKGRVGDDPNAEERLEEFENVDNAMKEFVRLFEEITGNEFEPWEREKKFQKKPMKFYPIDMDDGVEVRHGALGLRQLGIAVTHCKLEPLVANFMKVFCSQEIYKYALMEMGYDSPDLPIGMVTNLHLKRCEEVLLEFIEKVKSMKETGPKAEAVWADFSQRWFTLMHSTRPLIFRDYQEIAEHAASALEGVRDITVASHLIGDMSGSTIDDPLSDRYKKLGCSVSPLEKDSTDYGMIVKYLERTYEPVKVGDIEYGVTVDNIFVVEPSACPSYEDIVKLPNKVLLWCGSRSSNLLRHLQKGFLPAICSLPVPGYMFGKAIVCSDAAAEAAKYGFTAVDRPEGFLVLAIASLGNEITELKSPPEDTKSLEEKKLGVKALGRKKTDESEHFVWKDDIKVPCGRIVESEHKDSPLEYNEYAVYDPKQVRISYLVGVKYEEKDEVMDTAEGTNERA 818
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach9g00307 818 ProSiteProfiles PARP catalytic domain profile. 577 808 IPR012317 GO:0003950
Bach9g00307 818 SUPERFAMILY WGR domain-like 298 427 IPR036930 -
Bach9g00307 818 ProSiteProfiles PARP alpha-helical domain profile. 449 568 IPR004102 GO:0003950
Bach9g00307 818 Gene3D - 587 803 - -
Bach9g00307 818 Gene3D BRCT domain 180 280 IPR036420 -
Bach9g00307 818 SUPERFAMILY ADP-ribosylation 586 804 - -
Bach9g00307 818 SUPERFAMILY BRCT domain 184 286 IPR036420 -
Bach9g00307 818 Gene3D - 107 170 IPR038650 -
Bach9g00307 818 SMART PADR1_2 95 148 IPR012982 GO:0008270
Bach9g00307 818 Pfam PADR1 (NUC008) domain 97 147 IPR012982 GO:0008270
Bach9g00307 818 CDD BRCT_PARP1 187 262 - -
Bach9g00307 818 Pfam WGR domain 333 412 IPR008893 -
Bach9g00307 818 Pfam BRCA1 C Terminus (BRCT) domain 185 261 IPR001357 -
Bach9g00307 818 Gene3D - 32 106 - -
Bach9g00307 818 PANTHER DNA LIGASE 10 800 - -
Bach9g00307 818 SUPERFAMILY Domain of poly(ADP-ribose) polymerase 449 585 IPR036616 GO:0003950
Bach9g00307 818 Pfam Poly(ADP-ribose) polymerase, regulatory domain 450 583 IPR004102 GO:0003950
Bach9g00307 818 ProSiteProfiles BRCT domain profile. 182 274 IPR001357 -
Bach9g00307 818 Gene3D - 445 586 IPR036616 GO:0003950
Bach9g00307 818 MobiDBLite consensus disorder prediction 1 46 - -
Bach9g00307 818 MobiDBLite consensus disorder prediction 1 51 - -
Bach9g00307 818 SMART BRCT_7 184 264 IPR001357 -
Bach9g00307 818 FunFam Poly [ADP-ribose] polymerase 444 586 - -
Bach9g00307 818 SMART WGR_cls 333 416 IPR008893 -
Bach9g00307 818 Pfam Poly(ADP-ribose) polymerase catalytic domain 597 800 IPR012317 GO:0003950
Bach9g00307 818 ProSiteProfiles WGR domain profile. 322 422 IPR008893 -
Bach9g00307 818 ProSiteProfiles Generated from MSF file: '/work/www/psmaker/tmp/pfmake.input.483415'. 38 177 IPR047572 GO:0008270
Bach9g00307 818 CDD parp_like 449 800 - -
Bach9g00307 818 FunFam Poly [ADP-ribose] polymerase 587 803 - -
Bach9g00307 818 CDD WGR_PARP1_like 325 429 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach9g00307 Bach-Chr9 2221043 2225322 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach9g00307 K10798 - gmx:548024 1446.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach9g00307 9 2221043 2225322 Bach9g00307 9 2221043 2225322 ECH