Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach9g00256 ATGGCTGCGATTCCGTCTGAGAACGGCGTAGAAGGAGATGACGGGAGAGAAGAGGAGGATGAAGAAGAAGAGGAGGAAGAGGGTGAGGAAAACGAAGAGGAAGAGGAGCCGCGACTTAAGTACCAGAGAATGGGAGGCAGCATACCTTCTCTGCTAGCCAGTGACGCGGCGTCGTGTGTCGCGGTTGCTGAGCGGATGATCGCACTTGGTACCCATGATGGCACCGTTCATATCCTTGATTTTCTTGGGAATCAGGTGAAAGAATTCTCTGCTCATGCTGCTGTTGTTAACGACCTTAGCTTTGATATAGAAGGTGAATATGTTGGAAGCTGTTCTGACGATGGGTCAGTTGTAATAAACAGTCTTTTCACCGATGAGAAACTGAAATTTGAGTATCATCGCCCAATGAAGGCAGTTGCTCTGGATCCAGATTATGCAAGAAAAGCATCCAGGAGATTTGTCACTGGTGGTTTAGCAGGTCATTTATATTTTAATGCAAAGAAATGGTTGGGCTATCGTGATCAGGTTTTGCACTCTGGAGAGGGTCCAATACATGTGGTGAAGTGGCGAACAAGTCTTGTTGCTTGGGCAAATGATGCAGGAGTTAAGGTTTATGATACTGCTCATGACCAGCGTATAACATTTATTGAAAGACCACGAGGGAGTCCACGCCCTGAGCTATTGCTTCCTCACCTGGTTTGGCAGGATGACACCCTCTTGGTTATTGGCTGGGGGACATCAGTCAAAATTGCATCAATAAGAACAAACCACAATAAAGCAGCCAATGGGACCTATAGGCAAGTTTCCTTGTCAGGTTTGAACCAGGTGGATATTGTGGCATCTTTTCAAACTACATATTTCATCTCAGGAATTGCACCCTTTGGTGATACTTTGGTTGTACTAGCTTATGTTCCTGGGGAAGAAGATGGAGAGAAGGAGTTTAGTAGCACCGCTCCTTCACGGCAGGCGAATAAACACAATTTTAAGCAGGGTAATGCACAAAGACCAGAAGTACGTATAGTAACATGGAACAATGATGAACTTTCAACAGACGCTCTACCGGTGCATGGTTTTGAGCATTACAAGGCAAAGGACTATTCCCTTGCTCATGCTCCATTCTCAGGTAGCAGTTATGCTGGTGGTCAGTGGGCTGCTGGCGATGAGCCGCTCTACTACATTGTATCTCCAAAGGATGTAGTTATTGCAAAACCAAGGGATGCTGAAGATCATATTGCTTGGCTTCTTCAGCATGGGTGGCATGAAAAAGCTTTGGCTGCAGTTGAATCTGGTCAGGGGCCGAGTGAACTTCTTGATGAGGTGGGGTCTAGGTACCTTGATCATCTGATCGTGGAAAGAAAATATGCTGAAGCAGCATCTTTGTGTCCCAAGTTGCTGCGAGGATCAGCTTCAGCATGGGAGAGATGGGTTTTCCACTTTGCACACCTTCGTCAACTTCCTGTTTTGGTTCCTTATATGCCTACAGAAAGCCCCAGACTGCGTGATACTGTTTATCAGGTTGCTCTTGTTGCACTGGCTACAAACCCATCTTTTCATAAGGATCTCTTGTCTACTGTTAAATCCTGGCCATCAGTTATTTACTCTGCATTGCCTATTATATCAGCCATTGAACCTCAACTTAATACTTCGCCCATGACTGATTCACTCAAGGAGGCATTGGCGGAGTTATATGTCATTGATGGGAAATATGAGAAAGCCTTTTCATTGTATGCTGATCTATTGAAGCCAGAATTATTTGATTTCATTGATAAGCATAACCTGCATGATGCACTTCGTGAAAAGGTAGAACTTTACGCAGACTATGATCCAAAGATGCTGCTACCATTTCTTCGTAGCAGTCAGCACTATACCCTTGAGAAGGCCTACGAAATTTGCATCAAAAGAGATATATTGAGGGGGCAAGTCTTCATCTTAGGAAGGATGGGAAACTCAAAACAAGCCCTGGCTATCATTATTAATAAATTAGGGGATATAGAAGAGGCTGTAGAGTTTGTCACCTTGCAGCATGACGATGACCTTTGGGAAGAACTGATTAAGCAATGTCTTCACAAACCTGAGATGGTGGGCATACTATTGGAGCACACAGTTGGAAATCTTGATCCCCTCTACATTGTAAATAAAGTTCCCAATGGGTTGGAAATACCTCGGCTCAGGGATCGGCTGGTTAAAATTATCACTGATTACAGGACTGAAACATCACTTAGACATGGGTGCAATGATATCCTTAAGGCGGACTGTGTCAACCTCTTGATTAAGTATTACAAAGAGGCAAGACATGGAATTTATTTAAGCAACGAAGAAGATGAGCTAAGACCTAAAAGGAGTGACATTCATGCTCCTCTGGTGGTTGAGAGATCCCCAAGTCTGAGAACCATGGAGGTGAAGTCAAAGACTAAGGGAGGGGGAAGATGTTGTATATGTTTTGACCCCTTTTCAATACAGAATGTATCAGTCATTGTTTTCTTTTGCTGTCATGCATATCACACAACATGTCTTATGGACTCCTACACTAGTAGTAGCGAGAACGGCGCTGAAGCCACTTCCAAAGAGGCAGAAAAATATGATGTTTACAGTGGTCATCTGGACGATGATGATGAAGAAGAAGAAACCAACTTGGGTGGCCCTCGTATGCGTTGTATATTGTGTACTACTGCTGCAAATTAA 2682 0.4403 MAAIPSENGVEGDDGREEEDEEEEEEEGEENEEEEEPRLKYQRMGGSIPSLLASDAASCVAVAERMIALGTHDGTVHILDFLGNQVKEFSAHAAVVNDLSFDIEGEYVGSCSDDGSVVINSLFTDEKLKFEYHRPMKAVALDPDYARKASRRFVTGGLAGHLYFNAKKWLGYRDQVLHSGEGPIHVVKWRTSLVAWANDAGVKVYDTAHDQRITFIERPRGSPRPELLLPHLVWQDDTLLVIGWGTSVKIASIRTNHNKAANGTYRQVSLSGLNQVDIVASFQTTYFISGIAPFGDTLVVLAYVPGEEDGEKEFSSTAPSRQANKHNFKQGNAQRPEVRIVTWNNDELSTDALPVHGFEHYKAKDYSLAHAPFSGSSYAGGQWAAGDEPLYYIVSPKDVVIAKPRDAEDHIAWLLQHGWHEKALAAVESGQGPSELLDEVGSRYLDHLIVERKYAEAASLCPKLLRGSASAWERWVFHFAHLRQLPVLVPYMPTESPRLRDTVYQVALVALATNPSFHKDLLSTVKSWPSVIYSALPIISAIEPQLNTSPMTDSLKEALAELYVIDGKYEKAFSLYADLLKPELFDFIDKHNLHDALREKVELYADYDPKMLLPFLRSSQHYTLEKAYEICIKRDILRGQVFILGRMGNSKQALAIIINKLGDIEEAVEFVTLQHDDDLWEELIKQCLHKPEMVGILLEHTVGNLDPLYIVNKVPNGLEIPRLRDRLVKIITDYRTETSLRHGCNDILKADCVNLLIKYYKEARHGIYLSNEEDELRPKRSDIHAPLVVERSPSLRTMEVKSKTKGGGRCCICFDPFSIQNVSVIVFFCCHAYHTTCLMDSYTSSSENGAEATSKEAEKYDVYSGHLDDDDEEEETNLGGPRMRCILCTTAAN 893
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach9g00256 893 SMART ring_2 810 888 IPR001841 -
Bach9g00256 893 Pfam Region in Clathrin and VPS 601 692 IPR000547 GO:0006886|GO:0016192
Bach9g00256 893 MobiDBLite consensus disorder prediction 1 39 - -
Bach9g00256 893 FunFam Vacuolar protein sorting-associated protein 41 homolog 9 280 - -
Bach9g00256 893 Coils Coil 16 36 - -
Bach9g00256 893 Gene3D Tetratricopeptide repeat domain 553 756 IPR011990 GO:0005515
Bach9g00256 893 SMART WD40_4 82 121 IPR001680 GO:0005515
Bach9g00256 893 SMART WD40_4 44 80 IPR001680 GO:0005515
Bach9g00256 893 SMART WD40_4 170 206 IPR001680 GO:0005515
Bach9g00256 893 SMART CLH_2 539 696 IPR000547 GO:0006886|GO:0016192
Bach9g00256 893 SUPERFAMILY WD40 repeat-like 54 247 IPR036322 GO:0005515
Bach9g00256 893 Gene3D - 6 281 IPR015943 GO:0005515
Bach9g00256 893 MobiDBLite consensus disorder prediction 12 34 - -
Bach9g00256 893 ProSiteProfiles Clathrin heavy-chain (CHCR) repeat profile. 538 696 IPR000547 GO:0006886|GO:0016192
Bach9g00256 893 SUPERFAMILY RING/U-box 803 847 - -
Bach9g00256 893 CDD RING-H2_Vps8 808 889 - -
Bach9g00256 893 PIRSF Vps41 598 851 IPR016902 GO:0034058|GO:0046907
Bach9g00256 893 PIRSF Vps41 1 601 IPR016902 GO:0034058|GO:0046907
Bach9g00256 893 PANTHER VACUOLAR PROTEIN SORTING VPS41 18 601 IPR045111 GO:0006623
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach9g00256 Bach-Chr9 1834327 1841639 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach9g00256 K20184 - atri:130807046 1169.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach9g00256 9 1834327 1841639 Bach9g00256 9 1834327 1841639 ECH