Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach9g00252 ATGGCTCCAAAGCGTGCCCAGAAGATGGTGGTCCGAACCACAACAAGGAAAGTTATACAACGAAGTGTGCAGGTTTTAGTGGTTGGAAGCAGCAAAAGACCAACCCGTGGAAACAACAAACAAGAGCATGTGAGGACTGTTCCCATTGAAGAAGTGACTCCTCGAGCTGCACAATCACAAGCACGAGAGGATGACCAAAATGACAAAGTCGATGAATCAGAAGCAAAGAAACAGGTGTCAACGAAAACAAAGAGCCAACGAAAGAAGAGAAGAAGGGGAAGGAGAGAGGGAGAACACTACCACAGGTACGTGTACAGGGTACTGAAGCAAGTGCACCCTGATATGGGGATTTCATCCAAGGCTATGACTATTCTCAACAATCTGATGACTGACATGTTTGAAAGACTGGCTGATGAGGTTGCCAGGCTCAACAAGTACACGGGCCAAATCACATTGTCTTCAAGAGAGATCCAAGGGGCAGTGAAGCTGGTTTTGCCTGGTGAGCTTGGCAAGCATGCACTTGCTGAAGGGGCCAAAGCTGTGACAAATTACTTGTCTTACTACCACTGA 570 0.4719 MAPKRAQKMVVRTTTRKVIQRSVQVLVVGSSKRPTRGNNKQEHVRTVPIEEVTPRAAQSQAREDDQNDKVDESEAKKQVSTKTKSQRKKRRRGRREGEHYHRYVYRVLKQVHPDMGISSKAMTILNNLMTDMFERLADEVARLNKYTGQITLSSREIQGAVKLVLPGELGKHALAEGAKAVTNYLSYYH 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach9g00252 189 SUPERFAMILY Histone-fold 74 186 IPR009072 GO:0046982
Bach9g00252 189 PANTHER HISTONE H2B 75 185 IPR000558 GO:0000786|GO:0003677|GO:0030527
Bach9g00252 189 MobiDBLite consensus disorder prediction 28 98 - -
Bach9g00252 189 Pfam Core histone H2A/H2B/H3/H4 45 163 IPR007125 GO:0003677
Bach9g00252 189 SMART h2b3 90 186 IPR000558 GO:0000786|GO:0003677|GO:0030527
Bach9g00252 189 MobiDBLite consensus disorder prediction 82 97 - -
Bach9g00252 189 MobiDBLite consensus disorder prediction 57 81 - -
Bach9g00252 189 FunFam Histone H2B 61 187 - -
Bach9g00252 189 Gene3D Histone, subunit A 57 187 IPR009072 GO:0046982
Bach9g00252 189 PRINTS Histone H2B signature 141 158 IPR000558 GO:0000786|GO:0003677|GO:0030527
Bach9g00252 189 PRINTS Histone H2B signature 171 184 IPR000558 GO:0000786|GO:0003677|GO:0030527
Bach9g00252 189 PRINTS Histone H2B signature 119 139 IPR000558 GO:0000786|GO:0003677|GO:0030527
Bach9g00252 189 PRINTS Histone H2B signature 100 118 IPR000558 GO:0000786|GO:0003677|GO:0030527
Bach9g00252 189 PRINTS Histone H2B signature 158 171 IPR000558 GO:0000786|GO:0003677|GO:0030527
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach9g00252 Bach-Chr9 1807863 1808432 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach9g00252 K11252 - gmx:100786873 186.808
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach9g00252 9 1807863 1808432 Bach9g00252 9 1807863 1808432 ECH