Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach9g00218 ATGGCCTCAGCCAACGCTATCTCGTCGGCCTCCATTCTTCGCTCTCATAAACAGAGTTTGAGCAGGAAGGTAAACCAGCAGCCAAATGGTCGAATAAATTACAGGCAATCGAGCAATCGGTTTGTGGTCAAGGCTTCTGCAAAAGAGATTGCCTTTGACCAGCATTCTAGGACAGCCCTTCAGGCTGGCATTGACAAGCTTGCCGATGCTGTTGGACTTACACTTGGGCCTAGGGGGAGGAATGTTGTCCTAGATGAGTTCGGAAATCCAAGAGTAGTTAATGATGGAGTGACCATTGCTCGAGCTATTGAACTAGCTGATGCCATGGAAAATGCTGGTGCAGCTCTGATTAGAGAGGTTGCAAGTAAAACCAATGACTCTGCCGGTGATGGAACAACAACAGCATCAGTCCTTGCACGAGAAATAATTAAGCTGGGACTTCTCAGTGTGACATCTGGTGCTAATCCAGTGTCCATTAAAAGAGGAATTGATAAAACTGTACAGGATTTGATAGCAGAGCTTGAAAAGAACGCCAGGGCTGTAGAAGGCAGAGATGATATTAAAGCTGTTGCTACTATTTCTGCTGGAAATGATGAGCTGATTGGAACAATGATTGCGGATGCAATTGACAAGGTTGGACCTGATGGTGTGTTATCCATTGAGTCATCATCTTCTTTTGAGACAACAGTTGAAGTTGAAGAAGGAATGGAGATTGACAGAGGTTATATCTCTCCTCAATTTGTCACAAACCCTGAGAAGTCAATTGTTGAATTTGAGAATGCAAGAGTCTTGATCACTGATCAAAAGATTTCAGCAATAAAAGACATAATTCCTCTGTTGGAGAAGACCACTCAATTGAGAGCTCCTCTGCTTATCATTGCTGAAGATGTTACTGGTGAGGCCTTGGCTACCCTTGTTGTGAATAAATTGCGGGGTATCCTTAATGTCGCCGCCATCAAAGCTCCTGGATTTGGTGAGCGAAGAAAGGCTCTCCTTCAGGACATTGCCATTTTGACAGGTGCTGAATTCCAAGCCAGTGATTTGGGCCTGAATGTTGAAAACGCCTCAATTGAGCAGCTTGGTTTGGCTCGAAAAGTTACCATCTCCAAGGATTCTACCACTATTATTGCTGATGCTGCATCGAAGGATGAGTTGCAAGCAAGGATTGCACAGTTAAAGAAGGAGTTATCCGAGACAGACTCAGTCTATGACTCTGAGAAACTGGCTGAGAGGATTGCTAAATTATCTGGTGGAGTTGCTGTCGTCAAGGTTGGTGCTGCCACAGAGACTGAACTTGAGGATCGCAAGCTTCGCATTGAGGATGCCAAGAATGCAACTTTTGCTGCTATTGAGGAAGGGATTGTGCCTGGTGGAGGTACTGCATTGGTTCATCTGTCTTCTATTGTTCCTGCTATCAAGGACAAGCTTGAAGATGCAGATGAGCGGCTAGGAGCTGACATTGTGCAAAAGGCACTGGTAGCACCAGCAGCATTAATTGCTCAGAATGCTGGAATTGAAGGTGAAGTTGTTGTTGAGAAAATTAAAAATAGTGATTGGGAGGTTGGTTACAATGCTATGACAGACAAGTATGAGAATTTGGTGGAGGCTGGAGTGATTGACCCCGCCAAGGTATCAAGGTGTGCTTTGCAGAATGCTGCTTCAGTTGCCGGTATGGTATTGACCACGCAGGCCATCGTGGTAGAAAAACCTAAGCCCAAGGGTCCCGTAGCTGCTCCCCCACAAGGGCTTACTGTTTAA 1758 0.4534 MASANAISSASILRSHKQSLSRKVNQQPNGRINYRQSSNRFVVKASAKEIAFDQHSRTALQAGIDKLADAVGLTLGPRGRNVVLDEFGNPRVVNDGVTIARAIELADAMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSIKRGIDKTVQDLIAELEKNARAVEGRDDIKAVATISAGNDELIGTMIADAIDKVGPDGVLSIESSSSFETTVEVEEGMEIDRGYISPQFVTNPEKSIVEFENARVLITDQKISAIKDIIPLLEKTTQLRAPLLIIAEDVTGEALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAILTGAEFQASDLGLNVENASIEQLGLARKVTISKDSTTIIADAASKDELQARIAQLKKELSETDSVYDSEKLAERIAKLSGGVAVVKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGTALVHLSSIVPAIKDKLEDADERLGADIVQKALVAPAALIAQNAGIEGEVVVEKIKNSDWEVGYNAMTDKYENLVEAGVIDPAKVSRCALQNAASVAGMVLTTQAIVVEKPKPKGPVAAPPQGLTV 585
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach9g00218 585 Pfam TCP-1/cpn60 chaperonin family 67 570 IPR002423 GO:0005524
Bach9g00218 585 SUPERFAMILY GroEL-intermediate domain like 181 245 IPR027410 -
Bach9g00218 585 SUPERFAMILY GroEL equatorial domain-like 51 566 IPR027413 -
Bach9g00218 585 ProSitePatterns Chaperonins cpn60 signature. 448 459 IPR018370 GO:0005524|GO:0006457
Bach9g00218 585 Hamap Chaperonin GroEL [groEL]. 46 583 IPR001844 GO:0042026|GO:0140662
Bach9g00218 585 CDD GroEL 48 568 IPR001844 GO:0042026|GO:0140662
Bach9g00218 585 Gene3D - 50 567 IPR027413 -
Bach9g00218 585 SUPERFAMILY GroEL apical domain-like 227 419 IPR027409 -
Bach9g00218 585 Gene3D GroEL 235 416 IPR027409 -
Bach9g00218 585 FunFam 60 kDa chaperonin 235 416 - -
Bach9g00218 585 Gene3D - 180 453 IPR027410 -
Bach9g00218 585 PANTHER 60 KDA HEAT SHOCK PROTEIN, MITOCHONDRIAL 37 574 IPR001844 GO:0042026|GO:0140662
Bach9g00218 585 Coils Coil 375 402 - -
Bach9g00218 585 PRINTS 60kDa chaperonin signature 126 153 IPR001844 GO:0042026|GO:0140662
Bach9g00218 585 PRINTS 60kDa chaperonin signature 441 462 IPR001844 GO:0042026|GO:0140662
Bach9g00218 585 PRINTS 60kDa chaperonin signature 71 97 IPR001844 GO:0042026|GO:0140662
Bach9g00218 585 PRINTS 60kDa chaperonin signature 311 334 IPR001844 GO:0042026|GO:0140662
Bach9g00218 585 PRINTS 60kDa chaperonin signature 393 418 IPR001844 GO:0042026|GO:0140662
Bach9g00218 585 NCBIfam chaperonin GroEL 47 571 IPR001844 GO:0042026|GO:0140662
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach9g00218 Bach-Chr9 1567889 1571702 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach9g00218 - - cave:132163634 975.311
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach9g00218 9 1567889 1571702 Bach9g00218 9 1567889 1571702 ECH