Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach9g00079 TAAGGGTTCTTGTAAGAACCAGTCGCCGCCGGATTGATCTCTAATATCTCTGCTCTCATTCTTTCTTTTTTTTTGTTGATCTTAGAGCAGCAATTCTCAGCACACTGTTTTTATTTTTCTATTGTCTTGCCACTGTTTCTCACGTTAATTACGTTCCTGCAATACTTCTGCTAGATTTTTTATGAAACTCATGGCTTAGGAAACCAATTCAGAAAATGATAATATCAATTCTGCAATCATGTTTTATGTCTGATTCTGCGGTAGTTGTAGTTTAGCTCCAGGGATGACATTGGTGCATTTTTCAAGACGATAGTTTTTTCCACTAGCTGGAAGTGAGCGTCTCTCAAGTTGTAAATATGGGCTTAGCCACTTCGATGGGAAAAGTTTCGATTTTGGCGTTGCTTTAGGTTTAGGGTTTGATTATTGGTTGTGGGTAGTGATCACTTTAGCTATCTAAGCTTGATAGTTTGTTTTAGCCGTTGATAGTCTAATGATCAATTTGAGATTTTGAACATGTTGTCTGAATTGGGAAGAAGACCGATGCTTGGAGGTAACGAGGGGTCTTTTGGAGATGAATTGGAGAACGAGATAGGGATGTTGCTTCGCGAGCAACGTCGACAGGAGGCTGATGATCTTGAGCGCGAGCTCAATTTGTATAGAAGTGGATCAGCACCTCCTACTGTGGAGGGTTCTTTGAGTGCAGTTGGAGGGTTATTTGGTGCCGGCAGTGGTGCTTCCTTTTCTGAGCTTCCCGTGAGTAAAAATGGAAATGGGTTTGCGTCTGAGGAAGAGCTTAGGTCTGATCCAGCTTATCTTTCCTACTATTACTCGAATGTGAATTTGAATCCTCGACTCCCACCTCCATTACTATCAAAAGAGGATTGGAGGTTTACACAAAGGTTAAAAGGCGGAGCTTCGGTGCTGGGTGGAATTGGAGATAGGAGACAAGTTAATAGGTCTGATGATAATGATGGTAGATCATTGTTTTCGACTCCACCAGGTTTTAGCATGAGGAAACAAGAGAGTGAGGTGGAGAATGAAAAAACACGGGCTTCGCCTGAGTGGGGTGGTGATGGACTGATTGGCTTGCCTGGTCTGGGACTTGGGAGCAAACAAAAGAGCTTTGCAGAAATTTTTCAGGATGATTTAGGGCGTAATGCACTTGTGACAGGTCTTCCTTCTCGTCCAGCCAGCCGTAATGCTTTTGAGGAAAATGTTGATATCATAAGTTCTGCTGAAGCAGAGCTGGCTCATCTACGCCATAATTCCACAACCGCTGATGCTTTAAGATCAGGATCAAATGTTCAGGGTTCTTCAGCAGCCCAAAATATTGGTCCACCATCTTCCTATACTTATGCTGCTGCTCTAGGGTCTTCCTTGTCAAGAAGCACTACTCCCGATCCGCAAATTGTTGCTCGGGCTGCTAGTCCTTGTCTTACACCTATTGGGGGAGGGAGAGTTGCTGCCTCTGAGAAGAGAGGTATTACCAGTCCAGACGCTCTTAATGGTGCTTCATCTGGCATCAATGAGTCTGCTGATCTGGTAGCTGCATTTTCTGGCATGAACTTGTCAGCCGATGATGTGATAGATGGTGATAACCATTTGCCATCACAGGTTGAGTCAGATGTTGATAGTCACCAGAGATATCTTTTTGGTATGCAAGGTGGTCAGGATCATGGCAAGCAACATGCATCATATATGAAAAAGTCTGATTCAGGGCACTTGCAAAAGGCATCTTACACAGATTCAGGTAAGAGCGGTGGGAGTGGATCAGAAGTTAACAACTCATCCTTGGATAGGCAAGTTGAAATACAGAAGTCTGCTATTCCTTCTGGTAACTCATACTTTAAGGCATCCCCTACCTCTCCTTTTAGTAGTGGAGGTAGTTTGCCAGCTCAATACCAATCTTTAGATGGTACTCATTCATCTTTCACTAACTATAGCTTGAGCGGTTATCCTGGAAATCCAGCATTGGCATCCTTGATGGCCAACCAACTTGGCACTGGCAATCTTCCGCCCCTGTTTGAAAATGTTGTTGCTGCATCGGCAATGGCAGGACCTGGAATGGATTCAAGAATTCTTGGAGGAGGCTTGGCTTCTGGAGCAGCTGCTCCATCTGATGCACATAGTCTTGGTAGAATGGGAAATCAAATTGGAGGTGGTGCTCTTCAAGCGCCTTTTGTTGATCCCATGTATCTTCAGTACTTGAGGTCATCTGAGTCTGCTGCTCAACTTGCTGCTCTTAATGACCCCTCTGTAGACAGAAACTTCTTAGGAAATTCGTACATGAATTTACTTGAGCTTCAGAAAGCTTATCTTGGGGCACTGCTTTCACCTCAGAAGTCACAGTACAATGTTCCACTGGGTGGTAAATCAGGTGGCTCCAATCATCATGGCTATTATGGAAATCCTGCATATGGTGTTGGCTTGTCTTACCCTGGAAGCCCAATGGTGAACTCTGTTTTATCCGGTTCTCCAGTTGGATCTGGCAGTCCTATTAGGCACAATGAGCAGAATACACGTTTTGCTTCGGGGATGAGGAATTTAGCTGGGGGTGTCATGGGACCTTGGCACCTAGATGCTGGGTGTAACATGGATGAAAGCTTTGCTTCTTCTCTATTGGAAGAGTTTAAAAGCAATAAAACCAAGTGTTTTGAACTATCTGAAATTGCTGGTCATGTTGTTGAGTTTAGTGCGGATCAATATGGGAGCCGATTTATTCAACAAAAGCTTGAAACGGCAACCACAGAAGAAAAAAACATGGTTTATCAGGAAATCATGCCACAAGCTCTAGCTTTGATGACTGATGTCTTTGGTAATTATGTGGTTCAGAAGTTTTTTGAGCATGGACTTGCTTCTCAAAGAAGAGAATTAGCCAACAACCTTTTTGGCCATGTTCTCACTCTTAGCCTTCAAATGTATGGTTGTCGGGTGATCCAGAAGGCGATTGAAGTTGTTGATCTAGACCAGAAGATAAAAATGGTTCAGGAGCTTGATGGTCATGTCATGCGCTGTGTACGTGATCAGAATGGTAACCATGTTATTCAGAAGTGTATTGAATGTGTCCCTGAAGATGCAATCCAGTTTATTGTCTCAACTTTTTTTGATCAAATTGTGACACTTTCAACACATCCATATGGTTGTCGGGTGATACAGAGAGTAATGGAGCACTGTAAAGACCCTAAAACACAGCAAAAAGTCATGGATGAGATTTTAGCAGTTGTTAGCATGTTGGCTCAGGATCAGTATGGCAACTACGTTGTTCAGCATGTACTGGAGCATGGGAAACCTCATGAGCGTTCATCTATTATAAAGGAATTAGCAGGCAAGATAGTTCAAATGAGCCAACAGAAGTTTGCTTCCAATGTTGTGGAGAAGTGTTTGACCTTTGGGGGTCCTGCTGAACGCCAGTTACTAGTGAATGAGATGCTTGGATCTACAGATGAAAATGAACCCCTTCAGGCAATGATGAAAGATCAATTTGCAAATTATGTTGTACAAAAGGTGCTGGAAACTTGTGATGACCAACAACGTGAGCTGATTCTTTCACGAATTAAGGTTCACTTGAATGCTTTGAAAAAGTACACTTACGGAAAGCATATTGTTGCACGTGTAGAGAAACTCGTTGCTGCTGGAGAAAGGAGAATTGCTGCTCAGCCTCCTCATCCTGCTTAGTTGGGCATAGGAAAAGAATGTTGTTTGTACAGCTAACTGAGGCTAGTGTGAGCTTCCTCCTCTCTCACTCTTTCCTGCATCTAGAGCTTATCTTACCTATCTGTTGAGATAGCTAATAGCAGTTTGGAAATAAAGTTGTCGGTTGTACTGAAGAACTGTACATTTGTAGTCTAAGTTTATACATAGAATGTAAGCGAGATGAGGTTCAGATGTTTGATACACCTGATGCCCCTGCAGAGGAGATAAGATGACTATACAAGTCTTTTAAGGGTGTAAAGATCATAAAATTTGGTGAGGTAGTTTATACGTTGACGCGACTGTACAAAAAATGATGCCATGTGGAGAGCTGTTCATGTTTAGGGTGAGGGCAGGATTTTTCTTTCATGTATGGTTATTGACTGGGTTTTTTTTCTTTTAATAAGTACAATTTTTG 4108 0.4265 MLSELGRRPMLGGNEGSFGDELENEIGMLLREQRRQEADDLERELNLYRSGSAPPTVEGSLSAVGGLFGAGSGASFSELPVSKNGNGFASEEELRSDPAYLSYYYSNVNLNPRLPPPLLSKEDWRFTQRLKGGASVLGGIGDRRQVNRSDDNDGRSLFSTPPGFSMRKQESEVENEKTRASPEWGGDGLIGLPGLGLGSKQKSFAEIFQDDLGRNALVTGLPSRPASRNAFEENVDIISSAEAELAHLRHNSTTADALRSGSNVQGSSAAQNIGPPSSYTYAAALGSSLSRSTTPDPQIVARAASPCLTPIGGGRVAASEKRGITSPDALNGASSGINESADLVAAFSGMNLSADDVIDGDNHLPSQVESDVDSHQRYLFGMQGGQDHGKQHASYMKKSDSGHLQKASYTDSGKSGGSGSEVNNSSLDRQVEIQKSAIPSGNSYFKASPTSPFSSGGSLPAQYQSLDGTHSSFTNYSLSGYPGNPALASLMANQLGTGNLPPLFENVVAASAMAGPGMDSRILGGGLASGAAAPSDAHSLGRMGNQIGGGALQAPFVDPMYLQYLRSSESAAQLAALNDPSVDRNFLGNSYMNLLELQKAYLGALLSPQKSQYNVPLGGKSGGSNHHGYYGNPAYGVGLSYPGSPMVNSVLSGSPVGSGSPIRHNEQNTRFASGMRNLAGGVMGPWHLDAGCNMDESFASSLLEEFKSNKTKCFELSEIAGHVVEFSADQYGSRFIQQKLETATTEEKNMVYQEIMPQALALMTDVFGNYVVQKFFEHGLASQRRELANNLFGHVLTLSLQMYGCRVIQKAIEVVDLDQKIKMVQELDGHVMRCVRDQNGNHVIQKCIECVPEDAIQFIVSTFFDQIVTLSTHPYGCRVIQRVMEHCKDPKTQQKVMDEILAVVSMLAQDQYGNYVVQHVLEHGKPHERSSIIKELAGKIVQMSQQKFASNVVEKCLTFGGPAERQLLVNEMLGSTDENEPLQAMMKDQFANYVVQKVLETCDDQQRELILSRIKVHLNALKKYTYGKHIVARVEKLVAAGERRIAAQPPHPA 1053
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach9g00079 1053 ProSiteProfiles Pumilio RNA-binding repeat profile. 826 861 IPR001313 GO:0003723
Bach9g00079 1053 FunFam Pumilio homolog 1 isoform 2 697 1044 - -
Bach9g00079 1053 ProSiteProfiles Pumilio RNA-binding repeat profile. 790 825 IPR001313 GO:0003723
Bach9g00079 1053 MobiDBLite consensus disorder prediction 137 185 - -
Bach9g00079 1053 MobiDBLite consensus disorder prediction 1 24 - -
Bach9g00079 1053 MobiDBLite consensus disorder prediction 152 166 - -
Bach9g00079 1053 SUPERFAMILY ARM repeat 701 1035 IPR016024 -
Bach9g00079 1053 Coils Coil 31 51 - -
Bach9g00079 1053 MobiDBLite consensus disorder prediction 256 275 - -
Bach9g00079 1053 Pfam Pumilio-family RNA binding repeat 722 756 IPR001313 GO:0003723
Bach9g00079 1053 Pfam Pumilio-family RNA binding repeat 866 901 IPR001313 GO:0003723
Bach9g00079 1053 Pfam Pumilio-family RNA binding repeat 905 936 IPR001313 GO:0003723
Bach9g00079 1053 Pfam Pumilio-family RNA binding repeat 759 789 IPR001313 GO:0003723
Bach9g00079 1053 Pfam Pumilio-family RNA binding repeat 836 860 IPR001313 GO:0003723
Bach9g00079 1053 Pfam Pumilio-family RNA binding repeat 940 973 IPR001313 GO:0003723
Bach9g00079 1053 Pfam Pumilio-family RNA binding repeat 985 1014 IPR001313 GO:0003723
Bach9g00079 1053 Pfam Pumilio-family RNA binding repeat 794 827 IPR001313 GO:0003723
Bach9g00079 1053 PANTHER RNA BINDING PROTEIN PUMILIO-RELATED 100 1037 - -
Bach9g00079 1053 MobiDBLite consensus disorder prediction 381 426 - -
Bach9g00079 1053 Pfam Nucleic acid binding protein NABP 302 717 IPR012940 -
Bach9g00079 1053 SMART pum_5 935 970 IPR001313 GO:0003723
Bach9g00079 1053 SMART pum_5 790 825 IPR001313 GO:0003723
Bach9g00079 1053 SMART pum_5 718 753 IPR001313 GO:0003723
Bach9g00079 1053 SMART pum_5 826 861 IPR001313 GO:0003723
Bach9g00079 1053 SMART pum_5 754 789 IPR001313 GO:0003723
Bach9g00079 1053 SMART pum_5 862 898 IPR001313 GO:0003723
Bach9g00079 1053 SMART pum_5 977 1012 IPR001313 GO:0003723
Bach9g00079 1053 SMART pum_5 899 934 IPR001313 GO:0003723
Bach9g00079 1053 MobiDBLite consensus disorder prediction 401 426 - -
Bach9g00079 1053 ProSiteProfiles Pumilio RNA-binding repeat profile. 754 789 IPR001313 GO:0003723
Bach9g00079 1053 ProSiteProfiles Pumilio RNA-binding repeat profile. 971 1012 IPR001313 GO:0003723
Bach9g00079 1053 MobiDBLite consensus disorder prediction 438 458 - -
Bach9g00079 1053 CDD Pumilio 714 1034 IPR033712 GO:0003723
Bach9g00079 1053 ProSiteProfiles Pumilio homology domain (PUM-HD) profile. 698 1038 IPR033133 GO:0003723
Bach9g00079 1053 ProSiteProfiles Pumilio RNA-binding repeat profile. 718 753 IPR001313 GO:0003723
Bach9g00079 1053 ProSiteProfiles Pumilio RNA-binding repeat profile. 899 934 IPR001313 GO:0003723
Bach9g00079 1053 ProSiteProfiles Pumilio RNA-binding repeat profile. 862 898 IPR001313 GO:0003723
Bach9g00079 1053 ProSiteProfiles Pumilio RNA-binding repeat profile. 935 970 IPR001313 GO:0003723
Bach9g00079 1053 Gene3D - 698 1044 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach9g00079 Bach-Chr9 550415 556580 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach9g00079 K17943 - gmx:100818836 1732.23