Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach9g00024 ATGCCAACTATTTTGCTAAGGACTTTCCTTGTTTACAACCTTCTAAATTCATTTCTCCTCTATCTAGTCCCCAAAAAGCTTAGAGCTTTCCTCCCCTCTTCTTGGTTCCCTCACCAAGTCAATCTCGTTGAAACCCCAACACCAACCTTGCTCTTTCCACCTTCGTCTTCTTCATCAAGGACCCATTATTACAAGAGGATGGACCCAAACGAGCTCAAACGTGTTTTCCAAATGTTTGATCGTAATGGGGATGGTCGAATCACCAAGAAGGAGCTAAATGACTCACTGGAGAACATGGGCATTTTTATTCCCGACAAAGAGTTAACGCATATGATTGAAAAAATTGACGTTAACGGGGATGGGTGTGTGGATATCGATGAATTTGGCGAGTTATACCAATCGATAATGGACGAACGTGATGAAGAAGAGGACATGAGGGAGGCATTCAAAGTGTTTGATCAAAACGATGACGGGTTTATCACCGTTGAAGAATTGAGGGCTGTTTTGGCATCACTTGGCCTAAAACAGGGAAGAACTGTAGAAGATTGCAAGAAGATGATTATGAAGGTGGATGTTGATGGAGATGGGATGGTCAACTACAAGGAGTTTAAGCAAATGATGAAGGGAGGTGGATTCAGTGCTCTGAGTTAA 651 0.4255 MPTILLRTFLVYNLLNSFLLYLVPKKLRAFLPSSWFPHQVNLVETPTPTLLFPPSSSSSRTHYYKRMDPNELKRVFQMFDRNGDGRITKKELNDSLENMGIFIPDKELTHMIEKIDVNGDGCVDIDEFGELYQSIMDERDEEEDMREAFKVFDQNDDGFITVEELRAVLASLGLKQGRTVEDCKKMIMKVDVDGDGMVNYKEFKQMMKGGGFSALS 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach9g00024 216 ProSiteProfiles EF-hand calcium-binding domain profile. 140 175 IPR002048 GO:0005509
Bach9g00024 216 ProSiteProfiles EF-hand calcium-binding domain profile. 178 213 IPR002048 GO:0005509
Bach9g00024 216 Pfam EF-hand domain pair 142 208 IPR002048 GO:0005509
Bach9g00024 216 Pfam EF-hand domain pair 71 133 IPR002048 GO:0005509
Bach9g00024 216 ProSiteProfiles EF-hand calcium-binding domain profile. 67 102 IPR002048 GO:0005509
Bach9g00024 216 CDD EFh 71 128 IPR002048 GO:0005509
Bach9g00024 216 ProSitePatterns EF-hand calcium-binding domain. 116 128 IPR018247 -
Bach9g00024 216 FunFam calmodulin-like protein 3 141 211 - -
Bach9g00024 216 Gene3D - 134 210 - -
Bach9g00024 216 FunFam Calmodulin-like protein 5 54 140 - -
Bach9g00024 216 ProSiteProfiles EF-hand calcium-binding domain profile. 103 138 IPR002048 GO:0005509
Bach9g00024 216 ProSitePatterns EF-hand calcium-binding domain. 153 165 IPR018247 -
Bach9g00024 216 SUPERFAMILY EF-hand 70 210 IPR011992 -
Bach9g00024 216 ProSitePatterns EF-hand calcium-binding domain. 80 92 IPR018247 -
Bach9g00024 216 PANTHER EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN 142 208 - -
Bach9g00024 216 CDD EFh 148 208 IPR002048 GO:0005509
Bach9g00024 216 SMART efh_1 182 210 IPR002048 GO:0005509
Bach9g00024 216 SMART efh_1 107 135 IPR002048 GO:0005509
Bach9g00024 216 SMART efh_1 144 172 IPR002048 GO:0005509
Bach9g00024 216 SMART efh_1 71 99 IPR002048 GO:0005509
Bach9g00024 216 Gene3D - 56 133 - -
Bach9g00024 216 ProSitePatterns EF-hand calcium-binding domain. 191 203 IPR018247 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach9g00024 Bach-Chr9 192288 192938 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach9g00024 5 214 EF-hand Containing Proteins AT2G43290 66.977 1.04e-96 279
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach9g00024 K13448 - qsa:O6P43_000072 340.887