Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach8g01456 ATGGTTGAGAAAACGTGGCAATACGAGCGTGTTTTTAACCACTTTGATGAGAACAAAGATAGTATGATATCATCGTTGGAGCTTCGGCAATGCGTGAAGGCAATAGGCGGAGAGTTGTCGGAGGAGGAGGCAGAGGAGGCGGTGGAATGTTTAGATGCCGACGGAGATGGGTTGGTGGGGTTGGATGATTTTGTTCGGTTTGTGGAGGGAGGAGAAGAGGAAGAGAAAGTGAATAACTTAAAAGAGGCTTTTAGAATGTATGAGATGGATGGGTGTGGTTGTATTACACCCAAGAGTCTTAAGAGGATGCTTAGTAGATTAGGTGAGTCTAGAAGCATAGACGAATGTCGAGTTATGATCGCTAGATATGATATCGACGGTGATGGGGTCATCTGTTTCGATGAATTTAGAGTCATGATGCTCTAA 426 0.4437 MVEKTWQYERVFNHFDENKDSMISSLELRQCVKAIGGELSEEEAEEAVECLDADGDGLVGLDDFVRFVEGGEEEEKVNNLKEAFRMYEMDGCGCITPKSLKRMLSRLGESRSIDECRVMIARYDIDGDGVICFDEFRVMML 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach8g01456 141 ProSitePatterns EF-hand calcium-binding domain. 52 64 IPR018247 -
Bach8g01456 141 CDD EFh 80 140 IPR002048 GO:0005509
Bach8g01456 141 SMART efh_1 115 141 IPR002048 GO:0005509
Bach8g01456 141 SMART efh_1 43 71 IPR002048 GO:0005509
Bach8g01456 141 SMART efh_1 79 107 IPR002048 GO:0005509
Bach8g01456 141 SMART efh_1 7 35 IPR002048 GO:0005509
Bach8g01456 141 ProSiteProfiles EF-hand calcium-binding domain profile. 111 141 IPR002048 GO:0005509
Bach8g01456 141 Gene3D - 70 141 - -
Bach8g01456 141 Pfam EF-hand domain pair 79 140 IPR002048 GO:0005509
Bach8g01456 141 Pfam EF-hand domain pair 9 68 IPR002048 GO:0005509
Bach8g01456 141 Gene3D - 5 69 - -
Bach8g01456 141 ProSiteProfiles EF-hand calcium-binding domain profile. 39 74 IPR002048 GO:0005509
Bach8g01456 141 SUPERFAMILY EF-hand 7 141 IPR011992 -
Bach8g01456 141 ProSiteProfiles EF-hand calcium-binding domain profile. 7 38 IPR002048 GO:0005509
Bach8g01456 141 ProSiteProfiles EF-hand calcium-binding domain profile. 75 110 IPR002048 GO:0005509
Bach8g01456 141 FunFam Calcium-binding protein CML38 71 141 - -
Bach8g01456 141 ProSitePatterns EF-hand calcium-binding domain. 124 136 IPR018247 -
Bach8g01456 141 PANTHER EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN 79 140 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach8g01456 Bach-Chr8 10025563 10025988 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach8g01456 3 140 EF-hand Containing Proteins AT1G76640 48.936 7.57e-43 137
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach8g01456 K13448 - dzi:111292747 192.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach8g01456 8 10025563 10025988 Bach8g01456 8 10025563 10025988 ECH