Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach8g01380 ATGGGGGCCAAACCAAAGAACGATAAGGAATCGAGATCAAAATGCTGCAACCCTGTTAAGAAACCAGGGCCTGTGACAATGGATCATATCCTCCTGGCATCACAGGAGACCAAGGAAGCAAGGGAACTCAGGATTCGTAGTCTTTTCAGTTTCTTTGATACGTCAAATTCTGGCTATTTAGATTTTGCCCAGATTGAGGCTGGTCTCTCAGCGCTTCAAATACCATCTGAATATAAGTATGCCAAAGATTTGTTAAATGCTTGTGATGCCAATAAAGATGGGCGAGTTGATTACCAAGAGTTCAAAAGGTACATGGATGACAAAGAGCTAGAGCTATACCGCATATTTCAAGCCATTGATGTTGAACATAATGGATGTATTTTGCCAGAGGAGCTTTGGGAGGCACTCGTAAGGGCAGGTATTCAAATTGATGATGAGGAACTTGCCCGTTTTGTTGAACGTGTTGATAAGGATAACAATGGGGTTATAACATTTGAAGAATGGAGGGATTTCCTGTTACTTTACCCTCATGAGGCAACTATTGAGAACATTTATCATTACTTGGAGAGGATATGCCTGGTTGATATTGGGGAACATGCTATTATCCCAGCAGGCATCAATAAGCATATCCATGCAAGCAGGTATCTGATTGCCGGAGGAGTAGCAGGAGCAGCATCACGAACAGCAACTGCACCCCTTGATCGATTAAAGGTGTTATTGCAAGTCCAAACAACACGGGCTCGTTTTATGCCTGCAGTAAAAGATATATGGAGAGAAGGTGGTATCTTGGGATTTTTTCGAGGCAATGGCTTAAATGTCCTTAAGGTCGCCCCAGAAAGTGCTATTAGATTTTATACTTATGAGATGCTAAAGACCTTCCTTGTGAATACTAAAGGAGAAGGGCCAAAACATGATATTGGCCCTATGGGGCGCTTACTAGCTGGTGGTATAGCTGGTGCTGTAGCTCAAACTGTTATCTATCCTATGGATCTGGTTAAAACTCGCATACAAACCTATGCTTGCAAAAGTGGAAGAGTTCCTGGTCTTGTAACCCTCTCAAAAGATATATGGGTTCAGGAAGGACCACGAGCATTTTATAGGGGCTTGGTTCCATCTCTTATTGGAATCATTCCTTATGCTGGAATTGATCTCGCTGCATATGAAACCTTCAAAGACATGTCCAAGAAGTATATTCTGCATGATGGAGAACCTGGTCCTCTTGTACAACTGGGCTGTGGAACAGTATCTGGAGCGCTTGGAGCAACATGTGTTTACCCATTTCAGGTTGTCAGAACAAGAATGCAGGCTCAGCGCTCTAATACCGGTGCTTCTTACACGGGAATGGGTGATGTATTTAGGAGAACCTTTGAACGTGAAGGGTTTAGGGGATTCTACAAAGGACTATTTCCTAACCTGCTCAAAGTTGTTCCCTCTGCAAGTATCACTTATATGGTTTACGAACGCATGAAAAAGGGTTTGGATTTGGGCTGA 1491 0.4299 MGAKPKNDKESRSKCCNPVKKPGPVTMDHILLASQETKEARELRIRSLFSFFDTSNSGYLDFAQIEAGLSALQIPSEYKYAKDLLNACDANKDGRVDYQEFKRYMDDKELELYRIFQAIDVEHNGCILPEELWEALVRAGIQIDDEELARFVERVDKDNNGVITFEEWRDFLLLYPHEATIENIYHYLERICLVDIGEHAIIPAGINKHIHASRYLIAGGVAGAASRTATAPLDRLKVLLQVQTTRARFMPAVKDIWREGGILGFFRGNGLNVLKVAPESAIRFYTYEMLKTFLVNTKGEGPKHDIGPMGRLLAGGIAGAVAQTVIYPMDLVKTRIQTYACKSGRVPGLVTLSKDIWVQEGPRAFYRGLVPSLIGIIPYAGIDLAAYETFKDMSKKYILHDGEPGPLVQLGCGTVSGALGATCVYPFQVVRTRMQAQRSNTGASYTGMGDVFRRTFEREGFRGFYKGLFPNLLKVVPSASITYMVYERMKKGLDLG 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach8g01380 496 Gene3D - 123 198 - -
Bach8g01380 496 FunFam Calcium-binding mitochondrial carrier protein SCaMC-1 123 198 - -
Bach8g01380 496 Pfam Mitochondrial carrier protein 405 493 IPR018108 -
Bach8g01380 496 Pfam Mitochondrial carrier protein 209 296 IPR018108 -
Bach8g01380 496 Pfam Mitochondrial carrier protein 305 396 IPR018108 -
Bach8g01380 496 Gene3D - 2 112 - -
Bach8g01380 496 Gene3D Mitochondrial carrier domain 205 493 IPR023395 -
Bach8g01380 496 ProSiteProfiles Solute carrier (Solcar) repeat profile. 306 393 IPR018108 -
Bach8g01380 496 PANTHER SOLUTE CARRIER FAMILY 25 168 493 - -
Bach8g01380 496 ProSiteProfiles EF-hand calcium-binding domain profile. 112 142 IPR002048 GO:0005509
Bach8g01380 496 ProSiteProfiles EF-hand calcium-binding domain profile. 143 178 IPR002048 GO:0005509
Bach8g01380 496 ProSiteProfiles Solute carrier (Solcar) repeat profile. 210 293 IPR018108 -
Bach8g01380 496 SMART efh_1 44 72 IPR002048 GO:0005509
Bach8g01380 496 SMART efh_1 111 139 IPR002048 GO:0005509
Bach8g01380 496 SMART efh_1 147 175 IPR002048 GO:0005509
Bach8g01380 496 SMART efh_1 80 108 IPR002048 GO:0005509
Bach8g01380 496 FunFam Mitochondrial substrate carrier family protein 206 494 - -
Bach8g01380 496 FunFam Mitochondrial substrate carrier family protein 15 110 - -
Bach8g01380 496 SUPERFAMILY EF-hand 36 185 IPR011992 -
Bach8g01380 496 Pfam EF hand 82 103 IPR002048 GO:0005509
Bach8g01380 496 ProSitePatterns EF-hand calcium-binding domain. 89 101 IPR018247 -
Bach8g01380 496 PRINTS Mitochondrial carrier protein signature 366 384 IPR002067 GO:0055085
Bach8g01380 496 PRINTS Mitochondrial carrier protein signature 228 242 IPR002067 GO:0055085
Bach8g01380 496 PRINTS Mitochondrial carrier protein signature 215 228 IPR002067 GO:0055085
Bach8g01380 496 PRINTS Mitochondrial carrier protein signature 321 339 IPR002067 GO:0055085
Bach8g01380 496 PRINTS Mitochondrial carrier protein signature 268 288 IPR002067 GO:0055085
Bach8g01380 496 PRINTS Mitochondrial carrier protein signature 413 435 IPR002067 GO:0055085
Bach8g01380 496 ProSitePatterns EF-hand calcium-binding domain. 156 168 IPR018247 -
Bach8g01380 496 Pfam EF-hand domain pair 111 170 IPR002048 GO:0005509
Bach8g01380 496 ProSiteProfiles Solute carrier (Solcar) repeat profile. 404 492 IPR018108 -
Bach8g01380 496 ProSiteProfiles EF-hand calcium-binding domain profile. 40 75 IPR002048 GO:0005509
Bach8g01380 496 SUPERFAMILY Mitochondrial carrier 208 488 IPR023395 -
Bach8g01380 496 ProSiteProfiles EF-hand calcium-binding domain profile. 76 111 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach8g01380 Bach-Chr8 9454140 9456734 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach8g01380 4 495 EF-hand Containing Proteins AT5G51050 72.819 0.0 746
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach8g01380 K14684 - qsa:O6P43_006116 851.662
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach8g01380 8 9454140 9456734 Bach8g01380 8 9454140 9456734 ECH