Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach8g01363 ATGTTGCGTTTCAGTATCTCCATTGACCAGTTGCTTATCAGGAAGCTCATTCGCCTCAGTTCCTCTTATGGGCAAATGGACTATGCCACTCTTGTATTTCATCAATTGAATGCCCCTGATACCTTTACTTGGAATGTCATGATTAGGGAATATACTATCAATGGCTTCCCTGAACAGGCCCTTCTTCTGTTTGAGCTTATGCTATGCTATGGCTTTTCACCTGATAAATTCACCTTCCCATTTGTTATAAACGCTTGTAGGGCTTATTCTGCCCTTGATTTCGGAAAAATGACCCATGCTTTAGCAATCAAGAGTGGGTTCTCGAGCGATATATATGTGCAGAACACACTGATGAATCTTTATTTCAAGTGTGAAGATTCAGCTAATGGGTGTAAGGTGTTTGACAAAATGCCTGTCCGCAATGTGGTTTCGTGGACAACCATGATTACAGGGCTTGCTACTTGCGGGAAATTGGACGCTGCTAGAAGAATTTTTGAGCAAATGCCCTCTAAGAATGTTGTTTCATGGACGTCAATGATTGATGGATATGTAAAGGACCAGCAACCCATAGAGGCTTTTAAATTGTTTCAAAGAATGCAGCTTGACAATGTGAGACCAAATGAATTCACTGTGGTGAGCTTGATAAGAGCTTGCACAGAGATGGGGAGCTTAAAGTTGGGTAAATGGATTCATGATTTTGCTGTCAAGAATGGGTTTGAAATTGGACCTTTTCTGGGGACAGCTCTTATAGACATGTACAGCAAATGCGATAGTTTAGATGATGCAAGGAAAGTATTTGATAAGATGCAAATTAAAGCCTTGGCTACCTGGAATTCAATGATCACTAGCCTGGGTGTACATGGGATGGGAAAGGAAGCTCTTGAACTATTTGAAGAGATGGAGAAGTCAAATGTATTTCCGGACGCTATCACTTTTGTGGGTGTCTTTAGTGCTTGCTCTCATATGAATAACCTGGAAGAAGCTCAGAAGTACTTCAATCTTATGACAGAACATTATGGGATTCCACCTATCTTGGAGCACTATACCTGTTTGATTGAACTCTATAATCGTGCTACTAGGTCGGATGAGAGTGAGAAGCCAAATTACAATATGATTTCAGAGTTGCTACAAGGGAACAAGGTCATTGGTATTGCTGATATAAAGGATATTATTCACAGGCATAATGGGGAATCTGGGTACTTGTCTATGTAA 1212 0.4059 MLRFSISIDQLLIRKLIRLSSSYGQMDYATLVFHQLNAPDTFTWNVMIREYTINGFPEQALLLFELMLCYGFSPDKFTFPFVINACRAYSALDFGKMTHALAIKSGFSSDIYVQNTLMNLYFKCEDSANGCKVFDKMPVRNVVSWTTMITGLATCGKLDAARRIFEQMPSKNVVSWTSMIDGYVKDQQPIEAFKLFQRMQLDNVRPNEFTVVSLIRACTEMGSLKLGKWIHDFAVKNGFEIGPFLGTALIDMYSKCDSLDDARKVFDKMQIKALATWNSMITSLGVHGMGKEALELFEEMEKSNVFPDAITFVGVFSACSHMNNLEEAQKYFNLMTEHYGIPPILEHYTCLIELYNRATRSDESEKPNYNMISELLQGNKVIGIADIKDIIHRHNGESGYLSM 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach8g01363 403 Gene3D Tetratricopeptide repeat domain 3 98 IPR011990 GO:0005515
Bach8g01363 403 FunFam Pentatricopeptide repeat-containing protein 42 161 - -
Bach8g01363 403 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 40 74 IPR002885 -
Bach8g01363 403 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 141 171 IPR002885 -
Bach8g01363 403 NCBIfam pentatricopeptide repeat 143 173 IPR002885 -
Bach8g01363 403 NCBIfam pentatricopeptide repeat 42 75 IPR002885 -
Bach8g01363 403 NCBIfam pentatricopeptide repeat 174 208 IPR002885 -
Bach8g01363 403 NCBIfam pentatricopeptide repeat 247 270 IPR002885 -
Bach8g01363 403 NCBIfam pentatricopeptide repeat 276 309 IPR002885 -
Bach8g01363 403 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 273 307 IPR002885 -
Bach8g01363 403 Gene3D Tetratricopeptide repeat domain 99 223 IPR011990 GO:0005515
Bach8g01363 403 PANTHER PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 9 366 IPR046960 GO:0003723|GO:0009451
Bach8g01363 403 SUPERFAMILY TPR-like 131 302 IPR011990 GO:0005515
Bach8g01363 403 FunFam Pentatricopeptide repeat-containing protein At3g26630, chloroplastic 182 336 - -
Bach8g01363 403 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 172 206 IPR002885 -
Bach8g01363 403 Pfam PPR repeat 140 168 IPR002885 -
Bach8g01363 403 Gene3D Tetratricopeptide repeat domain 224 368 IPR011990 GO:0005515
Bach8g01363 403 Pfam PPR repeat 247 270 IPR002885 -
Bach8g01363 403 Pfam PPR repeat family 39 86 IPR002885 -
Bach8g01363 403 Pfam PPR repeat family 171 218 IPR002885 -
Bach8g01363 403 Pfam PPR repeat family 275 320 IPR002885 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach8g01363 Bach-Chr8 9359120 9360331 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach8g01363 199 375 Glycoside Hydrolase AT3G49170 25.134 1.94e-10 60.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach8g01363 - - gmx:100789790 571.622
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach8g01363 8 9359120 9360331 Bach8g01363 8 9359120 9360331 ECH