Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach8g01351 ATGATCAGGATTAGATCTAACCTATCTGTTTTCTCTGTTGTGCTACGCATCTCCCAGAATTTTCTCCTTCTTAATCGTACCCATATAGTTGAGCAGCCCTTAGCTGCTGGCTTTAACAAGCCTTGGGTTTCTGAGAATTTATCTGCTCTGCCAAAATTTGGATTCTCAGTCCTTTTCTTTTCTTCATCTCCAACCACAGACTTCAGAGTATTAACTGACGCCCCTACACCAGGGTTGGATCAGGCGTCAAGTGGTGATGATGATGATCAGGAAGAGGATGACGAGCATGACCAGAATGATGATAAGAATGATAGCCATTTTGGTTTGTCAGAATTAAGAGATGATGATCTTGCCCGAGATGTCAAAACCATTTTGGATATATTGCATGAACCTGGGTGCAGTCTATCTGAAATCAAATACAAGCTTGAGCATTGCAGTATTACAGCATCAGCAGAGTTGGTTGTGGAGGTTCTTTCAAGAATTCGTAATGATTGGGAAGCAGCTTTCACCTTTTTCCTGTGGGCTGGCAAGCAACCAGGTTATGCTCATTCAGTCCGCGAGTACCATTCTATGATCTCTATCCTTGCCAAAATGAGGAAGTTTGATACTGCTTGGGCCTTAATTGAGGAAATGAGAGGAGGTAACACCCGTCCATCTCTTGTCACCCCTCAAACGCTCTTGATAATGATCAGGAGATACTGTGCTGTACATGATGTTGGAAGGGCTATAAATACTTTCTATGCTTTTAAACGGTTTAACTTTCAACTCGGATTAGAGGAATTTCAGAGTCTTCTTTCTGCCCTTTGCCGATACAAGAATGTGCGAGATGCTGAGCACTTGCTCTTTTGCAACAAAAATGTATTCCCATATAACACCAAAAGCTTTAACATTATTTTGAATGGATGGGGTAATGTAATTGGTAGCACTAGTCAAGCAGAGAGAATTTGGCAGGAGATGAGCAAAAGAGGAATACAATATGATGTTGTCTCTTATGCAAGCATCATATCTTGCTATTCAAAATCTTCAATGCTTTACAAGGTTCTCAGGCTGCATGACCAGATGAAGAAAATGAAGATCACTCCAGATAGGAAGGTTTATAATGCGGTAATTCATGCTCTTGCAAAAGGTAGGTTTGTTAAAGAAGCTGTTAACATCATGAAAACAATGGAATACAATGGAGTTGCTCCCGATGTTGCTACTTACAACTCACTGATCAAGCCTCTTTGCAAAGCTCGCAAAATGGATGAAGCCAAAGAAATATTCGATGACATGATGCAGCGTGGGCTGTCCCCTACCATTCGGACTTATCATGCTTTCTTTCGAATTTTGAGGACCGAGGAAGAAGTATTTGTGCTTTTGAACAAGATGAGAAAGTTGAGCTGCCACCCTACTATTGAGACTTACATAATGCTGATAAGAAAATTTTGCAGATGGCGTCAGCTTGATATAGTTTACAAGTTATGGAGTGAGATGAGTGAAAGTGGAGTCGGCCCTGACCGTAGCTCTTATATCGTGCTGATTCATGGGCTGTTTCTGAATGGGAAGTTGGAAGAAGCACATAAATATTATATAGAGATGCAGGAGAAAGGCTTTCTACCAGAACCAAAAACGGCTGAAATGCTTGAGGCTTGGGTTTCTGCGAGGCAGGTATCAGAGGGCCAAATGACGGAATTAGAATGCAATCAATTGAAAAATGGTAGTTTGAGAAAGAAAGACAAGACTATACCCAGTAAATTTGATCGAGAAAAAGATTTTCTTCGCCATCCTGAGACTAGAAGAGTAAAAAGAGAACGAGGGTTTTCGTTCTGGGAGGAGTAG 1818 0.4114 MIRIRSNLSVFSVVLRISQNFLLLNRTHIVEQPLAAGFNKPWVSENLSALPKFGFSVLFFSSSPTTDFRVLTDAPTPGLDQASSGDDDDQEEDDEHDQNDDKNDSHFGLSELRDDDLARDVKTILDILHEPGCSLSEIKYKLEHCSITASAELVVEVLSRIRNDWEAAFTFFLWAGKQPGYAHSVREYHSMISILAKMRKFDTAWALIEEMRGGNTRPSLVTPQTLLIMIRRYCAVHDVGRAINTFYAFKRFNFQLGLEEFQSLLSALCRYKNVRDAEHLLFCNKNVFPYNTKSFNIILNGWGNVIGSTSQAERIWQEMSKRGIQYDVVSYASIISCYSKSSMLYKVLRLHDQMKKMKITPDRKVYNAVIHALAKGRFVKEAVNIMKTMEYNGVAPDVATYNSLIKPLCKARKMDEAKEIFDDMMQRGLSPTIRTYHAFFRILRTEEEVFVLLNKMRKLSCHPTIETYIMLIRKFCRWRQLDIVYKLWSEMSESGVGPDRSSYIVLIHGLFLNGKLEEAHKYYIEMQEKGFLPEPKTAEMLEAWVSARQVSEGQMTELECNQLKNGSLRKKDKTIPSKFDREKDFLRHPETRRVKRERGFSFWEE 605
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach8g01351 605 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 464 498 IPR002885 -
Bach8g01351 605 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 291 326 IPR002885 -
Bach8g01351 605 Pfam PPR repeat 188 212 IPR002885 -
Bach8g01351 605 Pfam PPR repeat 467 496 IPR002885 -
Bach8g01351 605 Pfam PPR repeat 502 531 IPR002885 -
Bach8g01351 605 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 397 431 IPR002885 -
Bach8g01351 605 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 362 396 IPR002885 -
Bach8g01351 605 Pfam PPR repeat family 396 440 IPR002885 -
Bach8g01351 605 Pfam Pentatricopeptide repeat domain 314 373 IPR002885 -
Bach8g01351 605 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 184 218 IPR002885 -
Bach8g01351 605 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 327 361 IPR002885 -
Bach8g01351 605 Gene3D Tetratricopeptide repeat domain 141 283 IPR011990 GO:0005515
Bach8g01351 605 Gene3D Tetratricopeptide repeat domain 305 448 IPR011990 GO:0005515
Bach8g01351 605 Gene3D Tetratricopeptide repeat domain 449 583 IPR011990 GO:0005515
Bach8g01351 605 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 499 533 IPR002885 -
Bach8g01351 605 NCBIfam pentatricopeptide repeat 329 362 IPR002885 -
Bach8g01351 605 NCBIfam pentatricopeptide repeat 188 218 IPR002885 -
Bach8g01351 605 NCBIfam pentatricopeptide repeat 502 533 IPR002885 -
Bach8g01351 605 NCBIfam pentatricopeptide repeat 400 432 IPR002885 -
Bach8g01351 605 NCBIfam pentatricopeptide repeat 467 499 IPR002885 -
Bach8g01351 605 NCBIfam pentatricopeptide repeat 365 398 IPR002885 -
Bach8g01351 605 PANTHER MEMBRANE-ASSOCIATED SALT-INDUCIBLE PROTEIN-LIKE 163 552 - -
Bach8g01351 605 MobiDBLite consensus disorder prediction 84 98 - -
Bach8g01351 605 MobiDBLite consensus disorder prediction 71 109 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach8g01351 Bach-Chr8 9278475 9280292 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach8g01351 237 554 Glycosyltransferase AT1G05670 24.074 8.56e-27 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach8g01351 - - gmx:100812155 851.662