Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach8g01310 ATGAATCAGGATGCCATGAATGTTGATCACCCTCAGGCCACTGCGGAGGCGCAGATTTTACAGGGTCTGACAAGGGGTCCTTTGTCTTCGTCTGTTGCCAAGCTTTCAGGTTCTTCACGGTGCATACCCTCGGATAAAGACTTTCACTTCTATTATAACTTCCAAGAATTTAAGAATCCAATTGATGAAATCGCCAAAAAATCACAGTTGATGCTTGAAACCATCGGTTCCTCAGCGCATATATGGGGCAATGAAATGCCTTTTCCTATGGATATCGATGATGCCTATGAGTGGTTGGTTAACGTGAACGATGAGGTGTATGAGCGGTTTGATTTGTCGGTGGATGAGTTTCAGAGGATTCGGAAGAAAGAGGAAGAGACAGGACGTCCATTGAATTATTTGGAGGACTCGGAAAACCGATTCCAGTTGGTTTCTGGGAAGAAAAAGAAGGGGATGATGAGTCATCCGGAGGCAGGGAAAGAACATGAGCAACACTCTGCTCCAGCCTCGAACATTAAAGTGGCCACAAAGGATAAAAGAACTACTGGACCGAAACCCAAGGTGCCATTTCATATACCAACAATTCAAAGGCCTCAGAATGAGTATAACATATTAGTTAATAATTCGAACCAGCCTTTTGAGCATGTTTGGTTGCAGAGGAGTGATGATGGTCAGAGGTTTATTCATCCACTGGAAAAGTACTCTGTTTTGGATTTTGTTGATAAAGGTGTTGGGGATGTTGAGCCAATAAAACCTCCCTCAATAGAATGTACCCCTTTTAAGCTTGTAGAGGATGTCAAAGGTTTGAAAGAGTTGGCTTCTAAGCTGCATGCTGTTAATGAATTTGCGGTAGATTTGGAACATAATCAATATCGCTCATTTCAAGGATTGACTTGCTTAATGCAAATCTCAACCCGGACTGAAGATTTTGTGGTAGACACTTTGAAGCTTCGCATTCATATTGGACCTTATCTAAGAGAGGTTTTCAAGGATCCTACCAAGAGGAAGGTCATGCATGGAGCAGATAGGGATATTGTGTGGCTTCAACGGGATTTTGGCATTTACATTTGTAATCTATTCGACACTGGACAGGCCTCAAGGGTATTAAAATTGGAGAGAAATAGTTTGGAGCATCTTTTACATCACTTTTGTGATGTTATTGCTAACAAAGAATACCAAAATGCAGATTGGAGACTGCGCCCCCTTCCTCATGAGATGATAAGATATGCTAGAGACGATACACATTATCTACTATATATATATGATTTAATGAGAATAAGGTTACTTGCATTGCCTAAGGAGTCTGAAAGTTCCGATACTCCTCTGGTGGAGGTCTATAAGCGCAGTAATGATGTCTGCATGCAGCTGTATGAGAAAGAACTTCTGACAGAGAACTCCTATCTTCATATATATGGGTTGCAAGGGGCTGGTTTTGATGCTCAGCAGCTTGCCATCGTTTCGGGACTTTGTGAATGGCGGGATGTTGTTGCTCGTGCAGAGGATGAGAGTACTGGTTACGTATTGCCAAATAAAACTCTTCTTGAACTCGCTAAGCAGATGCCTGTCACAACAAGTAAGCTACGGCGACTGGTAAAAACAAAGCACCCTTATCTTGAGTGCAATCTTGACACTGTTGTCAGCATCATTAGGCATTCAATGCAAAATGCTGCCGCCTTTGAAGCAGCTGCACAACATTTGAAAGAGGGACGTTCTACAACTGTATCAGATGCTATAACTGCTGAAGATGGAACTGAAGCTCCCCTACCTGATACACCAAACTTGAAGGTTGCAAATGCCTTAAAAGAAAGTGGTGGAGTTGTAAATCCCAAAGGTGTAAACGTTTCAGAGAAATCACCTTCTTTTGATCTTGAAAAGTCGTCTTTTCAGCATCAAGATAAAAATGGACAAGCAAAATTTGTATCCAATCGTCTCTGCAAAGAGTTCCCAAGAGACAATCTCACAGTTTTTGAGCTGAGAAGGGATACAAATGTTAATGCACCCTCTACAACAAAGGGTACTGGAGCAACTGTTCAGGTGGTATCAAAGCCCGCTGGTGCTTTTGGGGCGCTGCTGGGAAATTCATCTTCAAAGAGGAAGCTTGATACTCATAAAAAGGAAGAGGTGAAGCTGGAGCAGATTAGATCTTCAGTCACCCTTCCTTTCCATTCATTTTTGGGTGGTAGTGATACATCAAAGCTAGTTGTAGAAACTCCTAGTACAACCTCTCAAATATTAGAGCCGCAGAAACCTGTTTCAGATAAAGTTTCCTCCCCCACTCTGGATGAGATTATAATGCTGGATGATGATACAGATAGAGAGAATGAGACACGAAAAAACCTAGAAAGCACAAATGAATGCAGGAAAAATAATTCTCTAGCGTCCGCTTCGGGAAAAGAGAATGAAGAAGAGCCAATGTCTCTCTCGGAATTGTCATCGAATTTTCAAGAATGCTTTAAGTCAAACAGCCAAAATGATAAAGCCAAACAGACCAAGAAAACTGAAGAACCCAGTGGCTTATTGCTGCTGAAGCCATTTGATTATGAAGAGGCAAGGAAACAGGTTAAGTTTGGGGAAGATACAGAGGTTTCCCAGGGAGATGATGGTCTTGCTCCAGTCCGTGACTCGGTTGGGAAGAAGAAAAGTTCAATAACAGGACGTGGACAAACAAGTGATTTGGCCAAGGAATTGCAGCAAGGTAAAAGACGTCAGGCATTTCCAGCTTCTGGGAATCGTAGTGCAACTTTCCGTTGA 2751 0.4224 MNQDAMNVDHPQATAEAQILQGLTRGPLSSSVAKLSGSSRCIPSDKDFHFYYNFQEFKNPIDEIAKKSQLMLETIGSSAHIWGNEMPFPMDIDDAYEWLVNVNDEVYERFDLSVDEFQRIRKKEEETGRPLNYLEDSENRFQLVSGKKKKGMMSHPEAGKEHEQHSAPASNIKVATKDKRTTGPKPKVPFHIPTIQRPQNEYNILVNNSNQPFEHVWLQRSDDGQRFIHPLEKYSVLDFVDKGVGDVEPIKPPSIECTPFKLVEDVKGLKELASKLHAVNEFAVDLEHNQYRSFQGLTCLMQISTRTEDFVVDTLKLRIHIGPYLREVFKDPTKRKVMHGADRDIVWLQRDFGIYICNLFDTGQASRVLKLERNSLEHLLHHFCDVIANKEYQNADWRLRPLPHEMIRYARDDTHYLLYIYDLMRIRLLALPKESESSDTPLVEVYKRSNDVCMQLYEKELLTENSYLHIYGLQGAGFDAQQLAIVSGLCEWRDVVARAEDESTGYVLPNKTLLELAKQMPVTTSKLRRLVKTKHPYLECNLDTVVSIIRHSMQNAAAFEAAAQHLKEGRSTTVSDAITAEDGTEAPLPDTPNLKVANALKESGGVVNPKGVNVSEKSPSFDLEKSSFQHQDKNGQAKFVSNRLCKEFPRDNLTVFELRRDTNVNAPSTTKGTGATVQVVSKPAGAFGALLGNSSSKRKLDTHKKEEVKLEQIRSSVTLPFHSFLGGSDTSKLVVETPSTTSQILEPQKPVSDKVSSPTLDEIIMLDDDTDRENETRKNLESTNECRKNNSLASASGKENEEEPMSLSELSSNFQECFKSNSQNDKAKQTKKTEEPSGLLLLKPFDYEEARKQVKFGEDTEVSQGDDGLAPVRDSVGKKKSSITGRGQTSDLAKELQQGKRRQAFPASGNRSATFR 916
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach8g01310 916 SMART hrdc7 479 559 IPR002121 GO:0003676
Bach8g01310 916 Gene3D HRDC domain 468 561 IPR044876 -
Bach8g01310 916 CDD Rrp6p_like_exo 256 448 - -
Bach8g01310 916 SUPERFAMILY Ribonuclease H-like 195 459 IPR012337 -
Bach8g01310 916 MobiDBLite consensus disorder prediction 856 916 - -
Bach8g01310 916 FunFam Putative exosome component 10 466 561 - -
Bach8g01310 916 Pfam HRDC domain 482 531 IPR002121 GO:0003676
Bach8g01310 916 Gene3D - 189 467 IPR036397 GO:0003676
Bach8g01310 916 MobiDBLite consensus disorder prediction 770 784 - -
Bach8g01310 916 FunFam Protein RRP6-like 2 isoform A 194 464 - -
Bach8g01310 916 SMART 35exoneu6 260 429 IPR002562 GO:0003676|GO:0006139|GO:0008408
Bach8g01310 916 MobiDBLite consensus disorder prediction 148 167 - -
Bach8g01310 916 MobiDBLite consensus disorder prediction 806 824 - -
Bach8g01310 916 Pfam PMC2NT (NUC016) domain 38 118 IPR012588 GO:0000176|GO:0006396
Bach8g01310 916 PANTHER POLYMYOSITIS/SCLERODERMA AUTOANTIGEN-RELATED 26 915 IPR045092 GO:0000175|GO:0000467
Bach8g01310 916 MobiDBLite consensus disorder prediction 739 755 - -
Bach8g01310 916 MobiDBLite consensus disorder prediction 148 169 - -
Bach8g01310 916 Pfam 3'-5' exonuclease 262 425 IPR002562 GO:0003676|GO:0006139|GO:0008408
Bach8g01310 916 MobiDBLite consensus disorder prediction 739 841 - -
Bach8g01310 916 SUPERFAMILY HRDC-like 464 554 IPR010997 GO:0000166|GO:0044237
Bach8g01310 916 ProSiteProfiles HRDC domain profile. 479 559 IPR002121 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach8g01310 Bach-Chr8 8966903 8974976 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach8g01310 K12591 - qsa:O6P43_009894 1233.01
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach8g01310 8 8966903 8974976 Bach8g01310 8 8966903 8974976 ECH